Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SYO3AOP1_0186 |
Symbol | |
ID | 6331384 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
Kingdom | Bacteria |
Replicon accession | NC_010730 |
Strand | - |
Start bp | 201380 |
End bp | 202921 |
Gene Length | 1542 bp |
Protein Length | 513 aa |
Translation table | 11 |
GC content | 28% |
IMG OID | 642656464 |
Product | Ion transport protein |
Protein accession | YP_001930385 |
Protein GI | 188996134 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTTTAAGT TAAAAAGAAA AAGATTAAAT CACAAAACAT TTGTAAAAAG ATTCAAACTG TTTTTATACA ATCTTTTAGA AAATGATAGA AATTCTCTAA ATCATATCTA TTCTATCTTT GCAATTTTTT TAGTTTTAAC ATCCTCAATT ACGGTTTTTC TATTAATATC TCCAAAAAGT GAAAAGCTTC CTCATGATTT ACATACTTTT CTTATAGACT TTGAAGAGTT TGCATTATTT TTCTTTTTGA TTGAATACAT ACTTAGATGG TGGGTTGTTT CTGATTTTAC AGAAGATTTT AAAGATTATT TAACTGAACA TAAACAAAGA AATTTAAAAG TATATTTTAA TGCCTTTTTA TATGCTTTAA AGCCAAAGCT TAAGTGGATG ATAAAGCCTT ATTCAATCGT AGACCTTCTT GCAATATTGC CAATCATAAG ACCTTTAAGA ATGCTTAGGA TATTCCAACT AATTAGACTA CTAAAACTTT TAAGATACTC TTCTGTATTT AGAAATTTCT TTTTTGCGTT TAAAGAAAAT GGCTTTGTCT TTACATTTAC TTTTTCAAGT TTGTTTGTAA ATATTATTTT CTTCTCTTTT TTAACATACA TCTATGAACA TAACGCAGGA AATAAAAATT TTGACAGCAT CTGGGCAGCC ATTTACTGGG GTATCATAAC ATCTTTTACA GTTGGATATG GAGATATAGT TCCTATTTCT GATGTAGGAA AGATTGCAGC ATCTTTAATG GTAATTATTA ATGTTATTTT AGTATCAGTT TTAACGGCGG GTTTTTCTGT TTCTTTTATA AACAAACTTT TAGAGTTGAA GGAAGGAGAA ATAGTCATGA GAGATTTAAA AGACCACATA GTTATTTGTG GATACAATGA AACATCTGAA GAAATCCTTG AAAAAATAAT GGAAAGCGAT ATAGATAAAG AAAAACCTGT TGTGCTTTTA ACAAACTATG ATAAAAAAGA CTTAGGAATA GAATTATCAA GGTATATCAT TTATAAAAAA GGGGATTTTA TCTTAGAAAA AAATCTTTTA GATGTTGGAA TAGAAAATGC TTCAGATGTA ATCATCGTCG GTGAAAAGCT ACTAAATCTA TCTGAGAGAG ATATAGATGC AAGAACAGCT TTAGCAGGTA TGCTTATTAG AACGCTTAAT CCAACAGTAA AACTTTATAT AGAAGTTCTT TTGGATGAAG ATGCAGAAAT TTTTAAAAAA CGAGTTGGAG CAAGGGAAGT TTTGATTCAT GGTCAGATAG TAGGAAAGAT AATGTTTTCA AGTTTATTAA ATCCGGGTGC AACAAACTTA ATAGAAACGT TATTAGATGT AGAGACAGGA ATTCAAAAAG TAAAAGTTAG AGAACTTGGA AGTTATAAAA CTTTCGGAGA GATTATAAAA ATCGTTAGAA AAGATGGCTA TTTACCGATT GCAGTAGAAA GAAGTAAAAA AATAATCTTA AATCCGGAAG ATGATTTTGA AATTCAAGAA AGTGATGCAA TATTTTTAAT ACCAAAAGGC GAATCTCAAT GA
|
Protein sequence | MFKLKRKRLN HKTFVKRFKL FLYNLLENDR NSLNHIYSIF AIFLVLTSSI TVFLLISPKS EKLPHDLHTF LIDFEEFALF FFLIEYILRW WVVSDFTEDF KDYLTEHKQR NLKVYFNAFL YALKPKLKWM IKPYSIVDLL AILPIIRPLR MLRIFQLIRL LKLLRYSSVF RNFFFAFKEN GFVFTFTFSS LFVNIIFFSF LTYIYEHNAG NKNFDSIWAA IYWGIITSFT VGYGDIVPIS DVGKIAASLM VIINVILVSV LTAGFSVSFI NKLLELKEGE IVMRDLKDHI VICGYNETSE EILEKIMESD IDKEKPVVLL TNYDKKDLGI ELSRYIIYKK GDFILEKNLL DVGIENASDV IIVGEKLLNL SERDIDARTA LAGMLIRTLN PTVKLYIEVL LDEDAEIFKK RVGAREVLIH GQIVGKIMFS SLLNPGATNL IETLLDVETG IQKVKVRELG SYKTFGEIIK IVRKDGYLPI AVERSKKIIL NPEDDFEIQE SDAIFLIPKG ESQ
|
| |