Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SYO3AOP1_0178 |
Symbol | |
ID | 6331376 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
Kingdom | Bacteria |
Replicon accession | NC_010730 |
Strand | - |
Start bp | 195480 |
End bp | 196211 |
Gene Length | 732 bp |
Protein Length | 243 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 642656456 |
Product | ABC transporter related |
Protein accession | YP_001930377 |
Protein GI | 188996126 |
COG category | [R] General function prediction only |
COG ID | [COG1137] ABC-type (unclassified) transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAAAAA GCAGGCTTGA GCTAAAAAAT ATAGAAAAAA GCTTTAAAAA TAGAACAGTA GTAAATGGTG TGTCTTTGTA TGCAGAAGAA GGGGAAATAG TGGGACTACT TGGTCCAAAC GGTGCCGGTA AGACAACTAC TTTTAAGTGT TTACTTGGTT TTTTAAAGCC GGAAAAGGGA AGTGTTCTAC TGAACGGTGA AGATATTACA GACCTTCCTG TTTGGGAAAG GGCAAAAAAA GGAATAAGCT TTCTACCACA AGAATCTTCA ATATTTAGAG ATTTGACCGT TTGGGACAAT CTTATGATGT TTTTAGAGTT TCAAAATTTG ACTGTTTCTG AGATGACATC AAAAGCGCAG GAGCTTTTAA AAGAGTTTAA TATAGACCAT CTTAAACATC AAAAAGCTTC GACCCTTTCA GGTGGTGAAA GGAGAAGGCT TGAGATAGCA AGAAGCTTGA TAATAAATCC TTCTTTTTTA CTCTTGGATG AGCCATTTGC AGGTGTAGAC CCTGTTTCTG TAAAAGATAT TAACCAGTTA ATCCTATCTT TAAAATCAAG AAATATAGGA ATAATCATCA CTGACCATAA TGTTAGAGAA ACATTAAAGA TAACAGACAG AGCCTACATA ATTGCCCATG GGAGAGTAAT AGCAGAAGGA ACTCCTCAAG AAATCGTAGA AAATCAAGAA GTTAAAAGAG TTTTTCTTGG AGAGGATTTT GTTTTGGTCT AA
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Protein sequence | MEKSRLELKN IEKSFKNRTV VNGVSLYAEE GEIVGLLGPN GAGKTTTFKC LLGFLKPEKG SVLLNGEDIT DLPVWERAKK GISFLPQESS IFRDLTVWDN LMMFLEFQNL TVSEMTSKAQ ELLKEFNIDH LKHQKASTLS GGERRRLEIA RSLIINPSFL LLDEPFAGVD PVSVKDINQL ILSLKSRNIG IIITDHNVRE TLKITDRAYI IAHGRVIAEG TPQEIVENQE VKRVFLGEDF VLV
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