Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpop_5399 |
Symbol | |
ID | 6313947 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium populi BJ001 |
Kingdom | Bacteria |
Replicon accession | NC_010725 |
Strand | - |
Start bp | 5774894 |
End bp | 5775910 |
Gene Length | 1017 bp |
Protein Length | 338 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 642654081 |
Product | PAS sensor protein |
Protein accession | YP_001928026 |
Protein GI | 188584581 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCGCGG CCGTGTCCTC GCTCATATCC GACGATGTTC TGCGCTTGGT CGAAGGCTTC GGTCTGACAG GGACGTGGTC CTGGAGCTTC ACCACGGACG AGCACGTCTG GTCACCGGGC CTCTTTCGGA TCCTCGGTCT CGAGCCGAGT ACGGCCCGGG CGGAATACGG CCTTCTGCTC GCCCTCGTTC ACCCGGAGGA CCGGGACAAG GTCACCTCGA CGTCGGAACT GCTCCAGACC GGCCAGATGA CGCAGCAGAC CTTCCGGATC ATCCGTCCGG ACGGGACCCT GCGCACCGTG ATGAGCCGCG GCGAGGTGAT CGTGGCGCCC AGCGGGCGTC CGCTGCAGGC CATGGGCGTG CTGATCGATG TCAGCGACCG TGAAATGCTG GCGCGTGCGC AGGCGGCTGA GCGTCGGCGC AAGAGGACCC TCTTCGAGCA GACGGGCGCA TTCACCTCCG TGACCCCCGT CTATCCCTAT ATCGACTTCT CGCCGGAGTG GCTGGAACTC GTCGGATTGC CGAGACAGGA ACTGCTCGAA GAGCCGACGC TTCCGGTTCT GAAAGAGGAG CGCACGCGCT GGCGCGACCA TGGCCGCGAA CTCTACCTCG CGCGAAAGGT CGTCCACACA CGCCCCCGAC TCATCCTGGC CAACGGCGAG ATCAAGCCGT ATCGCATGGT GATGGTGCCG ATGCGGAACA CCGCGGGCGA TGCCGACGGC TGGGTGAACT ACATCGCGCC CCTTCATCTC ACGGGGATGG CGCCCAACGC GATGCGGCAG AGTCTGGAGC AGCTCGTCCG CGGGATGCAT CTGCGCGCCG GCCGCGCGCT GCTCGGCTGG TCGATGCAGC AACTCGCCGA AGCGGCCGGC CTGTCGTTCT CCACCGTCCG CCGGCTCGAA GACGAGGACG AGAGCGCCTC GCGGCGCGCC TGCCAAGCGG CGGTCAGGGC GCTGCGAAGC CACGGCATCG TCTTCTCGTT CATGGACGAT GGAACGCTCG CGCTCGGGAA AACCTAA
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Protein sequence | MSAAVSSLIS DDVLRLVEGF GLTGTWSWSF TTDEHVWSPG LFRILGLEPS TARAEYGLLL ALVHPEDRDK VTSTSELLQT GQMTQQTFRI IRPDGTLRTV MSRGEVIVAP SGRPLQAMGV LIDVSDREML ARAQAAERRR KRTLFEQTGA FTSVTPVYPY IDFSPEWLEL VGLPRQELLE EPTLPVLKEE RTRWRDHGRE LYLARKVVHT RPRLILANGE IKPYRMVMVP MRNTAGDADG WVNYIAPLHL TGMAPNAMRQ SLEQLVRGMH LRAGRALLGW SMQQLAEAAG LSFSTVRRLE DEDESASRRA CQAAVRALRS HGIVFSFMDD GTLALGKT
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