| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpop_5377 |
|---|
| Symbol | |
|---|
| ID | 6312960 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium populi BJ001 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010725 |
|---|
| Strand | - |
|---|
| Start bp | 5750817 |
|---|
| End bp | 5751323 |
|---|
| Gene Length | 507 bp |
|---|
| Protein Length | 168 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 642654058 |
|---|
| Product | SCP-like extracellular |
|---|
| Protein accession | YP_001928004 |
|---|
| Protein GI | 188584559 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2340] Uncharacterized protein with SCP/PR1 domains |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.132089 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 0.43557 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGTCCGGAC GCCAGACCCT GCTCGCCGCA CCTGCGGCCC TCGCCCTCGT CGCCCTGCTC
CAGGGCTGCG CCGGGAAAGT GACGCCCGAC GCCACCGGCC TGCCCACCAT GTACCTGCCG
CTCACCACCG GCAGCACCAC GGTCGATACG GCTGCGGCCC GGGACATGAT CTCGGCCTAT
CGCCGCAACA ACGGCGCCGC GCCGCTGGTC ATCGATCCGG AATTGCAGCG GCTCGCCGAG
ACCGAGGCCG CCGCCATGGC CGCCTCCGAC CGGCCGAGCA AGAGCCAGAC GGTGCGCGCC
GCGGTGACCC GGCTCGGCTA CGACGGGGCG GATGCGAACC TCTCGGCGGG CTATCACACG
CTGGCCGAAG CGTTTTCGGG CTGGCGCGAC AGCCCCCCGC ACCGGGCCGT CATGCTCGCC
CCCGAGGCGA CGCGGATGGG CATCGCGACA GCCTACGCGC CGGGCTCGAA ATACAAGGTC
TACTGGGCGC TTCTGGTCGC CAAATAG
|
|---|
| Protein sequence | MSGRQTLLAA PAALALVALL QGCAGKVTPD ATGLPTMYLP LTTGSTTVDT AAARDMISAY
RRNNGAAPLV IDPELQRLAE TEAAAMAASD RPSKSQTVRA AVTRLGYDGA DANLSAGYHT
LAEAFSGWRD SPPHRAVMLA PEATRMGIAT AYAPGSKYKV YWALLVAK
|
|---|
| |