Gene Mpop_5303 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpop_5303 
Symbol 
ID6308718 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium populi BJ001 
KingdomBacteria 
Replicon accessionNC_010725 
Strand
Start bp5669619 
End bp5670995 
Gene Length1377 bp 
Protein Length458 aa 
Translation table11 
GC content71% 
IMG OID642653985 
Productprotein TolA 
Protein accessionYP_001927931 
Protein GI188584486 
COG category 
COG ID 
TIGRFAM ID[TIGR02794] TolA protein 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.477296 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.671035 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCTCTGC GCTGGCCCGA GTCGATCAGG AACCGTGAAC CCGGCGTCTG GATCTCCGCT 
GCGGCGCATG CCGCCGTGCT GGGACTCGCG CTGTTCGCGG TCGCTGCCCC GGCGCTTCCC
GACGCGCAGG AGGGCGTGCC GGTCGAGGTG CTGACCGAGC AGCAATTCTC TGAGCTGACC
CGCGGCGAGC GCAATGCGGA GAAGCCGGAG AACAATCCGA ACCGCGCCGA CCGCGTCTCC
GAGAAGATGG AGCAGCGTGA GCCGGAGAAC GCCAAGACCG ACGCGCCCGC CGCGCCCACC
CGCACCGCCG AGACCAAGCT CGCGGCCGTC GATGCGATGC CGCTGCGCGC CGACACCGCC
GATCCGGTGA AGGAGGAGGC CGAGGCCGCC GCGGCCAAGG CGGAGGCCGC GAAGGCCGAG
GCCGAGAAGG CGGCTGCCGC CAAGGCCGCT GACGCGAAGG CCAAAGCCGA GGCCAAGGCG
AAGGCGGAGG CCGCGGCGAA AGCGGAAGCC GCCAAGGCCG AGGCTGCCAA GGCGGCCGAG
GCCAAGGCCG CCGCCGCGAA GGCGGAAGCC GAGAAGCGCG AGGAACTCCA GAAGCTGATC
GAACGCGAGC AGGCGGACGC CGAAGCCGCC GCGAAGGCGG CCGAAGCCAA GGCCAAGGCA
CGCGCCGAGG CGAAAGCCAA GGCCGATGCC AAGGCGAAGG CGGAGGCCGA GGCTCACGCC
AAGGCGGAAG CCGAAGCCAA GGCCAAGGCC GAGGCCGCCG CGAAAGCCGA GGCGGAGGCC
GAGCACCGCA AGCAGGCCGC CGAGGCGAAG GCAAAGGCGG ATGCCGAGGC GAAGGCCAAG
GCCGAGGCCG CCGCGAAAGC CAAGGCGAAG GCGGTGGCCG AGGCCAAGGC GAAGGCCGAT
GCCGAAGCGA AGGCGCGCCA GCAGGCGGAA CTCGCCAACA AGTTCAGCCC CGGCGACATT
CGACAGACGC TCGCCTCGAA GGCCGCCTCG CAATCGACCG GCTCGACCGG CCGCGAAGTC
CAGCGCACGG CCTCGCTCGG CGCGGCGACG GGCAACGCCC AGCGCCTCTC GCCCTCGCTG
CGCGACGCCC TCGTCGGCAT GCTGCAGCAG CAGATCGAGC GGTGCTACTC GGCCCCGCCC
GGCGCGACGC AGGGCGTCGT GCTGCCGATG CTCGATATCC GCCTCAACCC GGACGGATCC
CTCACTGCCG AACCGCGGGT GATGCGTGCC GGAAACAACT CGGTCGATCA ATCGATCGCC
CAAGCGGCGC TTCGGGCGGT GCGGCGCTGC GCGCCCTACA AGATCCCGGC CCAGTACGCG
CCGTATTACA ACGACTGGAA GGCCATCAAC GCCGAGTTCG AGTTCTCGCC CGTGTGA
 
Protein sequence
MALRWPESIR NREPGVWISA AAHAAVLGLA LFAVAAPALP DAQEGVPVEV LTEQQFSELT 
RGERNAEKPE NNPNRADRVS EKMEQREPEN AKTDAPAAPT RTAETKLAAV DAMPLRADTA
DPVKEEAEAA AAKAEAAKAE AEKAAAAKAA DAKAKAEAKA KAEAAAKAEA AKAEAAKAAE
AKAAAAKAEA EKREELQKLI EREQADAEAA AKAAEAKAKA RAEAKAKADA KAKAEAEAHA
KAEAEAKAKA EAAAKAEAEA EHRKQAAEAK AKADAEAKAK AEAAAKAKAK AVAEAKAKAD
AEAKARQQAE LANKFSPGDI RQTLASKAAS QSTGSTGREV QRTASLGAAT GNAQRLSPSL
RDALVGMLQQ QIERCYSAPP GATQGVVLPM LDIRLNPDGS LTAEPRVMRA GNNSVDQSIA
QAALRAVRRC APYKIPAQYA PYYNDWKAIN AEFEFSPV