| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpop_5074 |
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| Symbol | |
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| ID | 6309460 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium populi BJ001 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010725 |
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| Strand | + |
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| Start bp | 5434535 |
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| End bp | 5436883 |
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| Gene Length | 2349 bp |
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| Protein Length | 782 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642653756 |
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| Product | Hemolysin-type calcium-binding region |
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| Protein accession | YP_001927705 |
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| Protein GI | 188584260 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG2931] RTX toxins and related Ca2+-binding proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGAAGA TTTCCGTCAC CTGGGCAAAT GGATCCTCGA TCAACTTGGC CGGGAGCAAG
GCGAGTCTGA TCCTCGCGAC GGCACAGGCG GCTGCCGACT CGTGGGCCAA GCACATCCAA
GGTGAGAGCA CGATCGAGAT CGCGCTCGGG ATCGGCAATG TCGGCGGCGG CAGTTACATT
GCCAACGGCG GCCCTAAACA GGTCTGGAGC GGGGGCTGGT GGGCCACCGC CATCCTCGAG
GCCCGCGAGG GATATGACGC GAACGGCGGC ACGCCGGAAG GCATAGTCAC ACTCGGCGAG
CACAGGCTCG GCGATTTGTT CTACGATCCG GCAGGGGTTG CGGGTGTTCC GCGCAACAAG
ATCGATGCCC TGACCCTTTT CAAGCACGAG ATCGGCCACG CGCTGGGCTT CATCGATTTC
CCTGCCACGA AAGCGGCGAA CGGAGCGCTC GTCTTCAATG GCGAGAACAC GCGGACGGTT
CTCGGCGGTC CGGCCCTGCT CGATGGAAGC CGGTCGCACG TGGTGGGACG CGAGGATCTC
ATGGATCCCT ATTCCAATTG GGGCGGGCGG TCCGGCATCT CGGATCTCGA CTTGGCCATG
CTTCAGGACA AGGGGATGCC GATCGCGACC GAGCGGACCG ACAAGATCTG GCTCGGCAAC
CGGGCCGACA CCTTTTTCGG CTATGGCGGC GACGACTGGA TCGACGGCGG CCGGGGCGAC
GACAAGCTCT TCGGCGGCCT GGGCAACGAC ACGCTCAGCG GCGGGGATGG GAACGACGCG
CTGGACGGGG GCGAGGGCAA CGACACGCTC AGCGGCGGAA ATGGGAGCGA CACGCTGGAT
GGGGGCGCTG GCACCGATAG GGCCGTGTTC GCGGGCCGGA GCCAGGACTA CGTTGCGCTC
TACGGCGCGA CCGGCGCCCT CGCCCTCAAG CATCTCGCCT CCGGCAGCAT CGATACGCTG
ACCTCGATCG AGACGCTGAC CTTCGACGAC ACCGTGCTCG GCGTGCCGGG CCTCCTCGCC
CACCTGCAAC AGCGCTACGG GACGACGCAG GCCGGCAAGG CGCCCTACGA GATGGCCCTG
AACGCCGCCT CGGACGAGGC CTACCGCGCC GAAATCCCCG AGATCGACGG CGCATTCAGC
GTGACCGCGC GGGTGACGTT CGACGACGTC GCCGGCGGCT ACTTCCAGCG CGTCTTCGAT
ACCGGCAACG GCGCGGGCCG CGACAACATC TGGCTCGGTC AGGTCGGCAA CAGCCGGGAC
ATGGCCTTCG AGATCCTCGA TGGCGCGATG AAGCATCGCA TCACCGCCAA GGACGTCATC
AAGCAGGGCG TCGAGGCGCA ATGGACCGCC GGCGTCGACG AGCGGGGCTG GATGTCGCTC
TACAAGGACG GCGTGCTCGT CGCCGAGGGT CAGGGGGCGG TGCCGCGCGA CGTGACACGC
ACGAATGATT TCGTGGGCAA ATCCAACTGG GCGCACGACA CGGCCTTGAA GGGCAGCATC
TACGACCTGA CCTTCAAGGA CGACCTGCCC GACATCCACG GTGCCTTCAC CGCCAGCGCG
ACGGTCCGGT TCGATGATCT CGATGCCGGC GCGTGGCAGC GTGTCTACGA CATCGGCAAC
GGTCCCAACG CCGACAACGT CTTCCTCAGC CAGATCGGCA CCTCCAAAGA CATGCAGTTC
ACGATCATGA ACGGCAGCAA GTCCGCCAGC ATCGTGGCCA AGGGTGCGAT CGTCGAGGGC
GAGGAAGCGA CCTGGACGAC CAACGTCAAC GAGAGCGGCT GGATGCGCCT GTTCAAGGAC
GGCGCGCTCC TGGCCGAGGG ACAGGGCATC GTCCCGAAGG ACGTCGCACG GATCAACGAG
TTCGTCGGCA AGTCCAACTG GCAGGCGGAC AAACCGCTCG TCGGCGAGGT GAGCGACCTG
ACGATCACGC CGTTCCAGGG GATCCCGGAG ATCGACGGCG CCTTCAAGAT GTTCGCCGAG
GTCCGCTTCG ACGATCTCTC CCACGGGAAT TACCAGCGCG TCTTCGATAC CGGCAACGGT
CCGTGGAGCG ACAACATCTG GCTCGGCCAG GTCGCCAACG GTGACGACAT GGCCTTCGAG
ATCTTCACGG GCAGCACGAA GCACCGGATC ACGGCGGCGG ACGCCATCGT CGAGGGTGAG
ATGGCGAAGT GGCAGGCCAG CGTGGACGAG GCCGGCTACA TGCGCCTGAT CAAGAACGAC
AAGGTCGTGG CCGAGGGGCA GGGCGCGGTT CCGCTGGATG TGCTGCGCAC GAACGATCTG
GTCGGCCACT CCAACTGGTC GTGGGATACC GCGCTGGTCG GACAGGTGAA GGATCTGATC
TTCGCCTGA
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| Protein sequence | MTKISVTWAN GSSINLAGSK ASLILATAQA AADSWAKHIQ GESTIEIALG IGNVGGGSYI
ANGGPKQVWS GGWWATAILE AREGYDANGG TPEGIVTLGE HRLGDLFYDP AGVAGVPRNK
IDALTLFKHE IGHALGFIDF PATKAANGAL VFNGENTRTV LGGPALLDGS RSHVVGREDL
MDPYSNWGGR SGISDLDLAM LQDKGMPIAT ERTDKIWLGN RADTFFGYGG DDWIDGGRGD
DKLFGGLGND TLSGGDGNDA LDGGEGNDTL SGGNGSDTLD GGAGTDRAVF AGRSQDYVAL
YGATGALALK HLASGSIDTL TSIETLTFDD TVLGVPGLLA HLQQRYGTTQ AGKAPYEMAL
NAASDEAYRA EIPEIDGAFS VTARVTFDDV AGGYFQRVFD TGNGAGRDNI WLGQVGNSRD
MAFEILDGAM KHRITAKDVI KQGVEAQWTA GVDERGWMSL YKDGVLVAEG QGAVPRDVTR
TNDFVGKSNW AHDTALKGSI YDLTFKDDLP DIHGAFTASA TVRFDDLDAG AWQRVYDIGN
GPNADNVFLS QIGTSKDMQF TIMNGSKSAS IVAKGAIVEG EEATWTTNVN ESGWMRLFKD
GALLAEGQGI VPKDVARINE FVGKSNWQAD KPLVGEVSDL TITPFQGIPE IDGAFKMFAE
VRFDDLSHGN YQRVFDTGNG PWSDNIWLGQ VANGDDMAFE IFTGSTKHRI TAADAIVEGE
MAKWQASVDE AGYMRLIKND KVVAEGQGAV PLDVLRTNDL VGHSNWSWDT ALVGQVKDLI
FA
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