Gene Mpop_4250 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpop_4250 
Symbol 
ID6311493 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium populi BJ001 
KingdomBacteria 
Replicon accessionNC_010725 
Strand
Start bp4541647 
End bp4542843 
Gene Length1197 bp 
Protein Length398 aa 
Translation table11 
GC content52% 
IMG OID642652933 
ProductCapsular polysaccharide biosynthesis protein-like protein 
Protein accessionYP_001926891 
Protein GI188583446 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG4421] Capsular polysaccharide biosynthesis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.305989 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGGCGCGA GCCATACAGA GGGCACGCCC AGCAAGCAAA TGAGTGCCCT GCCGGTTGAC 
CACCTTCGGG CTCGGCGAGC GCCTTGGGCT GCAGATCTGA TCGGCTTTGA AGGGCGCAAG
CTGATCGCGG GAGAGGTGCC CCTGACACTA CCAGAGATGA GGTGCGTCAA CGCTGAGATA
TTATCTCAGG ACGCTCTCGC AAGCTACACA AAGCTGAACG CCAACCGAGA GAAGTTGGTG
CCGAGCATAT CCGCATATGC CCTCGAAGAC GTCATCTTGC TTCCGCATGG CGCACTGCTT
GTTGATGGAA ACTTTGTGGA AGAGCCACTA AGCCGAATTC CTCAAGATGA TTTTATGAAA
GAGGTTTCCG CTTATTACAA TGCTCTTGAT GAGAGGGGTC GCGGAGACGA GAGCGTCTCT
ACGATGCGAA CGCCTTTGAT CGTTATCGAG CAGCCGGGCA TGTTCAATTA CGGCCACGTA
CTAGTTGAAA TGCTGCCGAA GTTAATACCT TTTTTATCAG ACCTCAGAAG CGGCAATGTC
AAGATTGCCC TGCAATCAAA GTATGTTAAT TACACTCATA TATTGGGTTT ATTCAATTTT
CTAGGCATTA AACAGAAGTC TATTGTCTGG TTTGATATTA GCGGCGACTC GGAGTGGGAC
TTTGTGAGGG TGCCGAGGCT GATCTATGTG TCCCCCATCT CGCGGCACCT CCACCCGAGC
TACAAAGCCC CCTGGGGCAT TGAAACGCTG TCTCGTATAA CATCCGGTAT CAAGCCGAAG
GTGCAGAGAC GGATCTTCAT CTCGCGGAAG GACGCTTACA ATAGGTTCTT GGTCAACGAG
GATCAAATTT TCAGCATCTT CGAAAAATTG GGTTACGAGC GGTTATGCAC GGGAGCAATG
CCATTTGAGG AGCAGGTTGC ACTATTCAAA GGCGCCACTC ACATCGCTGG TGTCTACGGC
GCGTCGCTCA CCAACGTAGT CTTCTGTGGG CCCGGCGCAA AAATGCTAAT GCTCTGCCCA
AGCAACTCGA TAGATCCATT CTATTGGGAG TTGGCGTCGG AGCGCGGCGT TTCGTACGTT
CATGTTGCCG GCCGACCAGT CGAGGGTCAG GAAGGCGAGC GCAACTGCGA CTTTCATGTA
GACGAGAAAG ACTTACGGAG CATCATTGGC GAATTTGATG CCGACGTGGA TCATTAA
 
Protein sequence
MGASHTEGTP SKQMSALPVD HLRARRAPWA ADLIGFEGRK LIAGEVPLTL PEMRCVNAEI 
LSQDALASYT KLNANREKLV PSISAYALED VILLPHGALL VDGNFVEEPL SRIPQDDFMK
EVSAYYNALD ERGRGDESVS TMRTPLIVIE QPGMFNYGHV LVEMLPKLIP FLSDLRSGNV
KIALQSKYVN YTHILGLFNF LGIKQKSIVW FDISGDSEWD FVRVPRLIYV SPISRHLHPS
YKAPWGIETL SRITSGIKPK VQRRIFISRK DAYNRFLVNE DQIFSIFEKL GYERLCTGAM
PFEEQVALFK GATHIAGVYG ASLTNVVFCG PGAKMLMLCP SNSIDPFYWE LASERGVSYV
HVAGRPVEGQ EGERNCDFHV DEKDLRSIIG EFDADVDH