Gene Mpop_4176 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpop_4176 
Symbol 
ID6311627 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium populi BJ001 
KingdomBacteria 
Replicon accessionNC_010725 
Strand
Start bp4460309 
End bp4460968 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content67% 
IMG OID642652866 
Productprotein of unknown function DUF159 
Protein accessionYP_001926824 
Protein GI188583379 
COG category[S] Function unknown 
COG ID[COG2135] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.829162 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGCAATC TCTACAGCCT CAACCGCCCC CAGGACGAGA TACGGCGGTG GTTCGACGTG 
AGCCACGACA GCGCCGGCAA CCTCCCGCCT CTCCCCGGCA TCTTCCCCGA CCAGATGGCC
CCCGTGGTCT GGGCCGGGAC GCAGGGGCGT GAGCTGACGA TGATGCGGTG GGGCATCCCC
GGGCCGAAGG CTTACGGAGA GCACCCCGTC ACCAACGTCC GCAACGTGAG GAGCCCGCAC
TGGCGCCCCT GGCTCAAGCC TGAGTTCCGC TGCCTCGTGC CCGTGTCATC GTTCAGCGAG
TATGCCGACA CGAAGCCGCG CAAGACCCCC GTCTGGTTCG CCCTGGACGA TGACCGTCCG
CTGTTCGCCT TCGCGGGCAT CTGGCGTCCC TGGACGGGCG TGAGGGGAAC CAAGAAGGAG
AACCCCGACA GGGTGGAGGA GGAGCACCGG CTGTTCTCCT TCCTCACGAC CGAGGCCAAC
GGCGTGGTCG GGCCGGTTCA CCAGAAGGCC ATGCCCGTGC TGCTCACAAC GAAGGAAGAG
TGCGGGACGT GGCTTGAAGC GCCCACGGAG GAGGCGCTGA GACTACAACG TCCTCTGCCT
GACGGGCTCA TGAAGGAGGT GGCGAGAGGC GAGCGTCACG ACGGGACGGC CCAGGGCTGA
 
Protein sequence
MCNLYSLNRP QDEIRRWFDV SHDSAGNLPP LPGIFPDQMA PVVWAGTQGR ELTMMRWGIP 
GPKAYGEHPV TNVRNVRSPH WRPWLKPEFR CLVPVSSFSE YADTKPRKTP VWFALDDDRP
LFAFAGIWRP WTGVRGTKKE NPDRVEEEHR LFSFLTTEAN GVVGPVHQKA MPVLLTTKEE
CGTWLEAPTE EALRLQRPLP DGLMKEVARG ERHDGTAQG