| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpop_4090 |
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| Symbol | |
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| ID | 6311829 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium populi BJ001 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010725 |
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| Strand | - |
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| Start bp | 4366440 |
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| End bp | 4368167 |
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| Gene Length | 1728 bp |
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| Protein Length | 575 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 642652785 |
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| Product | efflux transporter, RND family, MFP subunit |
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| Protein accession | YP_001926743 |
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| Protein GI | 188583298 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTGTTC TCTACGCCTC CGCCCTGCGG ACGGCTCTCC TGGCGTTTGG CCTCTGGGCC
GGTGCGCCGA CGCTCGCCGT CGCCCATGAG GGGCACGACC ACGGCAACGA GGCGCAGGCT
CCGGCGGCGG CTACAGCGCC GCGCAGTACG TCGAGCACCG ACGCGCTCGA ATTGGTCGCC
ATCGTCCGAA GCGGCCGCTT GGCCGTGTTC CTCGACCGTG TGGGCACCAA CGAGCCTGTG
ACGGACGCCG TCGTCCGAGC CGAGACGCCG GACGGCTCCC TCACCGCCTC GCCCATGCCG
GACGGCAGCT ACGCGGTCGA TGCACATTGG AGCCTGCACC CCGGCGAGCA CGAGGTGCTC
TTCACCGTGA CCGCGGCAGG CTCAACCGAC ATGTTTCCGG TCACGTTGAC GGTGCGGGAG
GCACCGCCGC CGAAGTCTGA GGCGGGTGTC TCCGCGTGGG CATCCGGCCT CGCCGCGGCC
CACGACTTTC AGCGCCACCT GAAGGAGGCC GACCCGCTGC CGCTGGCCAT CGGCGGCACC
GGCTTCCTTC TCGGCATCGC GGTCACGCTC CTGATGAAGG GGCGCCGTTA CTTGCCGGCC
ACTGCCCTCG TCGCCCTCAT CGTCGCCCTC GCGTTCGCGC CGCGCGCCTT CGCGGGCGAG
GGGCACGGTC ACGGGAGTGC CCCCGGATCG CAAACCACCC TCATGGCCGC CCCGGCGCCG
GCGGGACAGG ACTTGGCGCG ACGTCAACCG GACGGGTCGA TCTTCGTGCC CAAGCCCACC
CAGAGGGTAC TGGCCGTGCG CACGGTGGTG ACATCCTCCG ACATCATGCG CCGCACCGTC
GAGCTGCCGG GGCGCATCGT GCCCGATCCG AGTGCCAGCG GGGTCGTGCA GTCCTCGGTC
GGCGGCCGGC TCTCGCCGCC GGAATCCGGG ATCTTCCCGC GGCTCGGCAC GCGGGTGCGC
AAGGGCGAGG TGCTGGCCTA TGTCACGCCG CCGGTGCAGG CGGTCGACGC CTCCGACATG
CGCCAACGCC AGGGCGAACT CGACCAGCAG ATCGCAGTCA CGGAGCGACG GGTCGAACGT
TACCGCAAGC TCGCACCGGG CGGCGCCGTA TCGCAGGTGC AACTGGAGGA CGCCCAGGCC
GAGCTGAAGG GTCTGCTCGA CCGCCGCGCC GCCCTCGACA CAATCCGCCA GCAGCCCGAA
GCACTCAAGG CGCCGGTCGA CGGCGTGATC GCCGAGGCGA CCGCCGTGGC CGGGCAGATG
GCGAGCCCCG GCGTGCAGGT GTTCCAGATC GTCGACCCGA CCCGCCTCTG GATCGAGGCG
CTGAGCTTCG ACGCCCTCAC CGGCGGCCAG CACGCCACCG CCCGCCTTGC CGACGGTCGC
ATGCTGCGCC TCGCCTACAT GGGCGCAGGG CTCGCCGACC GCAGCCAAGC CGTGCCGATG
CACTTCGCCG TCGAAGGCGC GCCGTCGGAA CTGCGGACCG GGCAGTTCGT CACCGTGCTG
GCCGCAACCG ACGCACAGCA GAAGGGGTTG GCGCTTCCGC GCATGAGCGT GGTGCGTGGC
GGCAACGGCC AAAGCATCGT CTACGAGCAC ACCGCGCCGG AGCGCTTCGA GCCCCGCGAG
GTGCGGGTCG AGCCGCTCGA TGCGGGGCAG GTGCTGGTCG TCTCCGGGCT CGCCGCGGGC
AAGCGGATCG TGACCCAAGG CGCCGAACTC CTCAACCAGG TCCGCTGA
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| Protein sequence | MRVLYASALR TALLAFGLWA GAPTLAVAHE GHDHGNEAQA PAAATAPRST SSTDALELVA
IVRSGRLAVF LDRVGTNEPV TDAVVRAETP DGSLTASPMP DGSYAVDAHW SLHPGEHEVL
FTVTAAGSTD MFPVTLTVRE APPPKSEAGV SAWASGLAAA HDFQRHLKEA DPLPLAIGGT
GFLLGIAVTL LMKGRRYLPA TALVALIVAL AFAPRAFAGE GHGHGSAPGS QTTLMAAPAP
AGQDLARRQP DGSIFVPKPT QRVLAVRTVV TSSDIMRRTV ELPGRIVPDP SASGVVQSSV
GGRLSPPESG IFPRLGTRVR KGEVLAYVTP PVQAVDASDM RQRQGELDQQ IAVTERRVER
YRKLAPGGAV SQVQLEDAQA ELKGLLDRRA ALDTIRQQPE ALKAPVDGVI AEATAVAGQM
ASPGVQVFQI VDPTRLWIEA LSFDALTGGQ HATARLADGR MLRLAYMGAG LADRSQAVPM
HFAVEGAPSE LRTGQFVTVL AATDAQQKGL ALPRMSVVRG GNGQSIVYEH TAPERFEPRE
VRVEPLDAGQ VLVVSGLAAG KRIVTQGAEL LNQVR
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