Gene Mpop_3950 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpop_3950 
Symbol 
ID6312189 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium populi BJ001 
KingdomBacteria 
Replicon accessionNC_010725 
Strand
Start bp4209691 
End bp4210803 
Gene Length1113 bp 
Protein Length370 aa 
Translation table11 
GC content68% 
IMG OID642652652 
ProductLuciferase-like monooxygenase 
Protein accessionYP_001926612 
Protein GI188583167 
COG category[C] Energy production and conversion 
COG ID[COG2141] Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGTCC GGACCGACCT TTCCTCGCCC GAGCCGATCC GCTTCGCCTA TTGGGTGCCC 
AACGTCTCGG GCGGTCTTGT CATCAGCAAG ATCGAGCAGC GCACGAGCTG GGACTTCGAC
TATAACCGCA AGCTCGCGCA GATCGCGGAA TCCTCGGGCT TCGACTACGC GCTGACGCAG
ATCCGCTTCA CCGCCGGCTA CGGCGCCGAG TACCAGCACG AATCCGTCGC CTTCAGCCAC
GCCCTGGCGG CGGCGACCAC GCGGCTCACC GTGATCGCCG CGATCCTGCC CGGTCCCTGG
AACCCGACGC TGGCGGCCAA GCAGATCGCC ACGATCTCGC AACTCACGGA AGGGCGCATC
GCCGTCAACA TCGTCTCGGG CTGGTTCTCC GGCGAGTTCC GGGCGATCGG CGAGCCCTGG
CTCGACCATG ACGAGCGCTA CCGCCGCTCG GAGGAGTTCA TCCGCTCGCT TCGCGGGATC
TGGACGCAGG ACAGCTTCAC CTTCCGCGGC GATTTCTACC GCTACAGCGA CTACACCCTG
AAGCCGAAGC CGGGCCCACG CCTGCCCGAG ATCTTCCAGG GCGGCTCCTC GCGGGCGGCC
CGCGACATGG CCGCCCGCGT CTCCGACTGG TACTTCACCA ACGGCAACAC GCCCGACGGC
GTGCGGGCCC AGGTCGAGGA CATCCGCGCC AAGGCGAGCG CGAACGGCCA TTCGGTGAAG
GTCGGCGTCA ACGCCTTCGT GATCGCCCGC GACACGGAGG AGGAGGCCCG CGCCGTCCTC
CAGGAGATCA TCGCCAAGGC CGACCCGGAC GCGGTGAAGG CCTTCGGCCA TGAGGTGAAG
AATGCCGGCA AGGCCTCGCC CGAGGGCGAG GGCAACTGGG CGAAATCGAC GTTCAACGAT
CTCGTCCAGT ACAACGACGG CTTCAAGACC AATCTGATCG GCACCCCCGA CCAGATCGCC
GAGCGTATCC TCGCGCTCAA GGATGCCGGC GCCGACCTCG CCCTGCTCGC CTTCCTGCAT
TTCCAGGAGG AGGTGCAGTA TTTCGGCGAG CAGGTGATCC CGCGGGTGCG GGCGCTCGAA
GCCGCCCGCG AGCGCCGCGC CGAGGCGGCC TGA
 
Protein sequence
MTVRTDLSSP EPIRFAYWVP NVSGGLVISK IEQRTSWDFD YNRKLAQIAE SSGFDYALTQ 
IRFTAGYGAE YQHESVAFSH ALAAATTRLT VIAAILPGPW NPTLAAKQIA TISQLTEGRI
AVNIVSGWFS GEFRAIGEPW LDHDERYRRS EEFIRSLRGI WTQDSFTFRG DFYRYSDYTL
KPKPGPRLPE IFQGGSSRAA RDMAARVSDW YFTNGNTPDG VRAQVEDIRA KASANGHSVK
VGVNAFVIAR DTEEEARAVL QEIIAKADPD AVKAFGHEVK NAGKASPEGE GNWAKSTFND
LVQYNDGFKT NLIGTPDQIA ERILALKDAG ADLALLAFLH FQEEVQYFGE QVIPRVRALE
AARERRAEAA