Gene Mpop_3929 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpop_3929 
Symbol 
ID6312226 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium populi BJ001 
KingdomBacteria 
Replicon accessionNC_010725 
Strand
Start bp4182005 
End bp4182391 
Gene Length387 bp 
Protein Length128 aa 
Translation table11 
GC content72% 
IMG OID642652631 
ProductLrgA family protein 
Protein accessionYP_001926591 
Protein GI188583146 
COG category[R] General function prediction only 
COG ID[COG1380] Putative effector of murein hydrolase LrgA 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.319977 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGTCA GCCTGACCCT GATCCTGCTC GCCCAGCTCC TCGGCGAGGT CGCCGCGCGC 
GCCGCCGGCC TTCCGGTGCC GGGGCCGGTG TTCGGCATGG CGCTGCTCCT CGCCTTCCTG
GTCCTGCGCG ACCGGACGCA GCCGGCCTCG ACCCGCTGGC TGCCGCCTCC GCTGGTCGAT
GGCGGGCTGG AGGGCACCGC CAAGGGGATG CTCGCGCATC TCTCGATCCT GTTCGTGCCG
GCCGGCGTCG GCATCGTCGG CAAGCTCGAT GTGCTGGCGA GCCACGGGGT GGCGCTCGCC
ATCGTGCTCA CTCTGTCCGT GACCCTGACC CTGGCGGCGA CCGTGCTCAC CTTCGTCGCG
GTCTCCAAGC TTCTGGACCG CCGATGA
 
Protein sequence
MIVSLTLILL AQLLGEVAAR AAGLPVPGPV FGMALLLAFL VLRDRTQPAS TRWLPPPLVD 
GGLEGTAKGM LAHLSILFVP AGVGIVGKLD VLASHGVALA IVLTLSVTLT LAATVLTFVA
VSKLLDRR