Gene Mpop_3920 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpop_3920 
Symbol 
ID6312237 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium populi BJ001 
KingdomBacteria 
Replicon accessionNC_010725 
Strand
Start bp4172549 
End bp4173274 
Gene Length726 bp 
Protein Length241 aa 
Translation table11 
GC content77% 
IMG OID642652622 
Productuncharacterized protein-like protein 
Protein accessionYP_001926582 
Protein GI188583137 
COG category[S] Function unknown 
COG ID[COG5343] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00106031 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.125751 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGAGG GCGCCTTCCC CCCGCCGTTC TGGGCCGAGG ACCCCGATGG GGCGGCCGGC 
GAGTACGTCC TCGGCACCCT CACGCCGAGC GAGCGCGCCG CCTTCGCGCG GGCCTTGGAG
CAGGATCCCG CCCTGCGCGC GGCGGTGACG GCCTGGGAGA GGCGGCTGGC GCCGCTGGCT
GCAACGGCAC CGGCCGTCGC GCCCGGCCCG CAGGTCTGGG AGGCCATCGA GGCCCGGATC
GCGACGCCTC CGTTGGCCGA GGCCGCGGAT CTGCGGGTGC GGCGCCTGGA GCGCGGGCTG
CGGCGCTGGC GGTTCGCGGC GGGGGGCGCG GCGGCACTCG CGGCGGGCCT CGCCCTCTGG
ATCGTGGCGG CGCCGCCACC GGCGACCGTG GGCACGCCGC AATATCTGGC CGTGGTCGAC
CGGGGCGGCA GCCTTCCGGC GCTGATCGTG CGCGTCGATC TCGCCAGCGG CGTCGTGCAG
GTCCGCAGCC TCACGGCGGA AACCCCGCCC GACCGCAGCC TGGAGCTCTG GTACATCAAC
GAGGGCGCCG CGCCCCGCTC GCTCGGGCTG GTCACGGAGG CGACCGAGAC CATCCCGGTG
CCGGCCGATC TTCGCGACGG CGTCGCCCGC GCGACCTTTG CCGTCACGGT CGAGCCGAAG
GGCGGTGCGC CCGGCGGCAA GGCCACGGGC CCGGTCGTCT ATTCGGGCCG TCTCATCCGC
GATTAG
 
Protein sequence
MSEGAFPPPF WAEDPDGAAG EYVLGTLTPS ERAAFARALE QDPALRAAVT AWERRLAPLA 
ATAPAVAPGP QVWEAIEARI ATPPLAEAAD LRVRRLERGL RRWRFAAGGA AALAAGLALW
IVAAPPPATV GTPQYLAVVD RGGSLPALIV RVDLASGVVQ VRSLTAETPP DRSLELWYIN
EGAAPRSLGL VTEATETIPV PADLRDGVAR ATFAVTVEPK GGAPGGKATG PVVYSGRLIR
D