| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpop_3870 |
|---|
| Symbol | |
|---|
| ID | 6312338 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium populi BJ001 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010725 |
|---|
| Strand | - |
|---|
| Start bp | 4114719 |
|---|
| End bp | 4115474 |
|---|
| Gene Length | 756 bp |
|---|
| Protein Length | 251 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | 642652572 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_001926532 |
|---|
| Protein GI | 188583087 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1116] ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.0110799 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCGCGTC CCCTCCCTCG TCTCGCCCTC GCGGCCGTCG CGTACCAGTA CGGCCCGAGT
CCGGTGCTCG CCCGCATCGA TCTCGAGATC GCGGCGGGCG AGCGCGTCGG CATTCTCGGC
CGTTCGGGTG TCGGGAAATC GACCCTGCTG CAGATCATGG CCGGGCTCGT CGCGCCCTCC
TCCGGCCGGG TGCGGCTCGA CGGGCAGCCG TCGCGCGGGC CGGTGCCGGG CTGCACGGTG
ATGTTCCAGC GCCCTGCCCT GCTGCCCTGG GCGAGCGTGC TCGACAACGT GCTCCTGCCC
GCCCGCCTGT CGGGGCGCCT CGGCCGCGAT CGGGCGGTCT GCGAGGCGGA CGGACGCCGT
CTCCTCGACG ACCTCGGCCT CGGCGAGCGC GTGGAGGCAA AACCGCACCA GCTCTCGGGC
GGTCAGCAGC AGCGGGTGGC GCTGGCCCGG GCGCTGGCAA GCGAGCCCTC GATCCTGCTC
CTCGACGAGC CGTTCTCGGC ACTCGATCCC GAGATGCGCG CGAGCCTGCG CGCCGACGTG
CTGCGGCTCG CCCGCGCCCG CGACCTGACC CTGATCGTCG TCACGCACGA CCTCGCCGAC
GTCGCCGCGC TGGCGGCCCG TGCCGTGGTG CTCGACGGGC GCCCGGCCCG CATCGCCGCG
GATTTCGCCC TCGCTGACGA CGCGGAGGCG GATTTGCGCC GCCGTCTCGG CCGCCTCTCC
CGCGACGCGT CCGGCGTCAC CGGCCGCGCC GCCTGA
|
|---|
| Protein sequence | MSRPLPRLAL AAVAYQYGPS PVLARIDLEI AAGERVGILG RSGVGKSTLL QIMAGLVAPS
SGRVRLDGQP SRGPVPGCTV MFQRPALLPW ASVLDNVLLP ARLSGRLGRD RAVCEADGRR
LLDDLGLGER VEAKPHQLSG GQQQRVALAR ALASEPSILL LDEPFSALDP EMRASLRADV
LRLARARDLT LIVVTHDLAD VAALAARAVV LDGRPARIAA DFALADDAEA DLRRRLGRLS
RDASGVTGRA A
|
|---|
| |