Gene Mpop_3820 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpop_3820 
Symbol 
ID6312405 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium populi BJ001 
KingdomBacteria 
Replicon accessionNC_010725 
Strand
Start bp4068860 
End bp4069822 
Gene Length963 bp 
Protein Length320 aa 
Translation table11 
GC content60% 
IMG OID642652525 
Productsuperoxide dismutase (sodC), Cu-Zn family 
Protein accessionYP_001926486 
Protein GI188583041 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.673254 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones54 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAGCA GCTTGTCCGG ATTCTACGCC GTACCAGGGA CTGGCCTTTA TCCCGAAGGC 
CTTGCGTTCG ACGCGCGATC TCGAACGTTG TTCACCACCG CCATGCTGAA GGGCACGGTT
TTTCGCGTTG CGCTCGATGG ACGAGCCTTT GAGGTTTTTT CTGAGGCCGG CGCGCACGGT
TTGACCTCCT CAACAGGTCT CAAAGTAAAC GAGGCGACCC GGCAACTCGT GGTTTGCGGT
GGTGTGACTG GCCTCGTCCA CGTATTCGAT GTGGACACGG GCAGGGTGAT CGGCCGCTAC
TCGAATGGGT TGGTCAACGC AGCGCCAGAC ACGGTGGTCC CCAACCCTGC GGCCCCCACC
TTCGTCAACG ACGTTGCCTT CGCACACGGC GATGCCTTCA TCACCGACTC CTACAAACCG
GTGCTGTACC GGCTCACGGC GGCGGTGCTC GCAAGGGGAA CGGTGGCGGA ACTGGGACAG
CTCGAGCCGT GGCTACCGCT CGATGGCACG CCAATCAACT ACCAGGAAGA CGGTACGTCG
CCTGGACGTT TCAATCTCAA TGGCATCCTT GCGACTCCCA ACGAGCGCTT CCTGCTCGTC
GTCCAGACGA ACACGGGCAA GCTGTTCCGC ATCGAAGCGG TGACGCGCGA GATCATCGAA
CTCGCGGGCC ACGGCAATCC GGGCGGGGAC GGGCTCGCTT ACTTGTCCGA TACGGACGTG
CTGTCGATCG ACATGTCGAA AGAGCGAAGC CTGACACGGC TTCGGCTGTC GGCCGAGTAC
GACGCATACG AGGTGATCGG CGAGTACGAC ATGCCAGATA ACGCCTCCCC CACAGCAGGG
CTCGTCATTG ATGATCAACT TCTTCTGACC GAGAGCCAAA TCATTGATGT TCTATTCTCT
GGGAGGCCCG AGCGCTTACC GTACCGAGTA GTGAAGTATC CGCTCACCTC GATCGGCGAC
TGA
 
Protein sequence
MSSSLSGFYA VPGTGLYPEG LAFDARSRTL FTTAMLKGTV FRVALDGRAF EVFSEAGAHG 
LTSSTGLKVN EATRQLVVCG GVTGLVHVFD VDTGRVIGRY SNGLVNAAPD TVVPNPAAPT
FVNDVAFAHG DAFITDSYKP VLYRLTAAVL ARGTVAELGQ LEPWLPLDGT PINYQEDGTS
PGRFNLNGIL ATPNERFLLV VQTNTGKLFR IEAVTREIIE LAGHGNPGGD GLAYLSDTDV
LSIDMSKERS LTRLRLSAEY DAYEVIGEYD MPDNASPTAG LVIDDQLLLT ESQIIDVLFS
GRPERLPYRV VKYPLTSIGD