| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpop_3643 |
|---|
| Symbol | |
|---|
| ID | 6311808 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium populi BJ001 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010725 |
|---|
| Strand | + |
|---|
| Start bp | 3889587 |
|---|
| End bp | 3890207 |
|---|
| Gene Length | 621 bp |
|---|
| Protein Length | 206 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 642652365 |
|---|
| Product | cation efflux protein |
|---|
| Protein accession | YP_001926327 |
|---|
| Protein GI | 188582882 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1230] Co/Zn/Cd efflux system component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.0262252 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCCTCGTC TGCCGCCCTC GCCGAGCCTG CGCCCGGTCG TCGCCCGCGT GGCGGCGCTG
AACCTCGGCT ATTTCGGCAT CGAGATCGCG GTCGCGCTCG CCATCGGCTC GGTGGCGCTG
ATCGCCGACA GCCTCGACTT TCTCGAAGAC GCCGCGATCA ACCTCCTGAT CTTCGCAGGC
TTGAGCTGGA GCGTGCGCAA CCGGGCCCGG CTCGGCACGC TTCTGGCCGG CATCCTGCTG
GTGCCGGGCC TCGCCACGGC CTGGGCCGCC TACGAGAAGT TTTCGGACTT CACCACGCCG
GCTCCCGTGC CGCTGACGCT GACCGGCCTC GGCGCGCTTC TCGTCAACCT TGCCTGCGCG
CTGATGCTGG CGCGCCACCG CGACGGCCAT GGCAGCCTGA CCCGGGCGGC CTATCTCTCC
GCCCGCAACG ACGTGGCCGC CAACCTCGCG ATCATCGTCG CCGGCCTCGT GACCGCGCTG
ACGCTCTCGC CCTGGCCCGA CCTCGTGGCG GCGGCGGGCA TCGCCGTGAT CAACGCCGAT
TCCGCCTTCG ACGTGCTCAA GGCCGCCCGC CGCGAATGGC GGGCCGCGGC CGAGGACGCC
GCCTCGCGGG CGCGCGCCTA A
|
|---|
| Protein sequence | MPRLPPSPSL RPVVARVAAL NLGYFGIEIA VALAIGSVAL IADSLDFLED AAINLLIFAG
LSWSVRNRAR LGTLLAGILL VPGLATAWAA YEKFSDFTTP APVPLTLTGL GALLVNLACA
LMLARHRDGH GSLTRAAYLS ARNDVAANLA IIVAGLVTAL TLSPWPDLVA AAGIAVINAD
SAFDVLKAAR REWRAAAEDA ASRARA
|
|---|
| |