Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpop_3542 |
Symbol | |
ID | 6311529 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium populi BJ001 |
Kingdom | Bacteria |
Replicon accession | NC_010725 |
Strand | - |
Start bp | 3777280 |
End bp | 3778146 |
Gene Length | 867 bp |
Protein Length | 288 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 642652264 |
Product | glycoside hydrolase family 16 |
Protein accession | YP_001926226 |
Protein GI | 188582781 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2273] Beta-glucanase/Beta-glucan synthetase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGGCTC CGATCCTGCC GCCGGCCCTA CGCGCCGCCC TCGTCCTGTC TGCCCTGGCC GCCGGCCCGC TGGGCCCCTC CCCCGCCGCG GCGGCCGAGG AGGCGCTCGA CCTGTGCGCC TACAAGCCGG CCTTCATGGA GGAGTTCGAC AGCCTCAGCG TCGCCCCGCG GGTGCTGAAC GCCGCGCGCT GGATCTCGCA CACGCCCTGG AACGGCGATT TCGGCGATGC CCGCTTCGTC GACGACGCGC CGGCCGGCCC CTTCTCGATC AAGGACGGCA TCCTCCACAT CACCGCCCGG CGGGACGAGG CGGGCAAGTG GCGCTCCGGC CTGCTCGCCG CCTCGGACGG GACGGGTGCG GGGTTCGGCC TGCGCTACGG CTACTTCGAG GCTCGCATGC GCCTTCCGCC GGGACCGGGC ACCTGGCCCG CCTTCTGGCT CGGGACGAAG CGCCCGAACA CCGACAAGAC CCCGAGTATC GAGATCGACG TGATCGAGTA TTACGGTCAT TCGGATGCGG CCTACTCGGC GGCCCTGCAC GTCTGGTACA AGGGGGAGGA CAAGAAGCGC ACCACGAACA CGGTGCAGAA GATCCCGGTG CCGGCCGGTT CGCTCCTCGA CGACTTCCAT ACCTATGGCG TGCGGGTGAC GCCCGAGACC ATCACCTACT ATCTCGACCG CAAGCCGGTC TGGCGGCGGC CGACCCCGCC GGAACTCGAC AAGCCGCTGT TCCCCCTGGT CAACCTCGCC CTCGGCTCGG GCTTCCCGAT CGACAGGACG CCCAACCCCT CGGTGCTCCT CGTCGACTAT GTGCACGTCT ATGCCCCCGA TCCCGAGGGC CGGGCGGCGC GCTGCCCAGG GCATTGA
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Protein sequence | MKAPILPPAL RAALVLSALA AGPLGPSPAA AAEEALDLCA YKPAFMEEFD SLSVAPRVLN AARWISHTPW NGDFGDARFV DDAPAGPFSI KDGILHITAR RDEAGKWRSG LLAASDGTGA GFGLRYGYFE ARMRLPPGPG TWPAFWLGTK RPNTDKTPSI EIDVIEYYGH SDAAYSAALH VWYKGEDKKR TTNTVQKIPV PAGSLLDDFH TYGVRVTPET ITYYLDRKPV WRRPTPPELD KPLFPLVNLA LGSGFPIDRT PNPSVLLVDY VHVYAPDPEG RAARCPGH
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