Gene Mpop_3542 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpop_3542 
Symbol 
ID6311529 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium populi BJ001 
KingdomBacteria 
Replicon accessionNC_010725 
Strand
Start bp3777280 
End bp3778146 
Gene Length867 bp 
Protein Length288 aa 
Translation table11 
GC content70% 
IMG OID642652264 
Productglycoside hydrolase family 16 
Protein accessionYP_001926226 
Protein GI188582781 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2273] Beta-glucanase/Beta-glucan synthetase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGGCTC CGATCCTGCC GCCGGCCCTA CGCGCCGCCC TCGTCCTGTC TGCCCTGGCC 
GCCGGCCCGC TGGGCCCCTC CCCCGCCGCG GCGGCCGAGG AGGCGCTCGA CCTGTGCGCC
TACAAGCCGG CCTTCATGGA GGAGTTCGAC AGCCTCAGCG TCGCCCCGCG GGTGCTGAAC
GCCGCGCGCT GGATCTCGCA CACGCCCTGG AACGGCGATT TCGGCGATGC CCGCTTCGTC
GACGACGCGC CGGCCGGCCC CTTCTCGATC AAGGACGGCA TCCTCCACAT CACCGCCCGG
CGGGACGAGG CGGGCAAGTG GCGCTCCGGC CTGCTCGCCG CCTCGGACGG GACGGGTGCG
GGGTTCGGCC TGCGCTACGG CTACTTCGAG GCTCGCATGC GCCTTCCGCC GGGACCGGGC
ACCTGGCCCG CCTTCTGGCT CGGGACGAAG CGCCCGAACA CCGACAAGAC CCCGAGTATC
GAGATCGACG TGATCGAGTA TTACGGTCAT TCGGATGCGG CCTACTCGGC GGCCCTGCAC
GTCTGGTACA AGGGGGAGGA CAAGAAGCGC ACCACGAACA CGGTGCAGAA GATCCCGGTG
CCGGCCGGTT CGCTCCTCGA CGACTTCCAT ACCTATGGCG TGCGGGTGAC GCCCGAGACC
ATCACCTACT ATCTCGACCG CAAGCCGGTC TGGCGGCGGC CGACCCCGCC GGAACTCGAC
AAGCCGCTGT TCCCCCTGGT CAACCTCGCC CTCGGCTCGG GCTTCCCGAT CGACAGGACG
CCCAACCCCT CGGTGCTCCT CGTCGACTAT GTGCACGTCT ATGCCCCCGA TCCCGAGGGC
CGGGCGGCGC GCTGCCCAGG GCATTGA
 
Protein sequence
MKAPILPPAL RAALVLSALA AGPLGPSPAA AAEEALDLCA YKPAFMEEFD SLSVAPRVLN 
AARWISHTPW NGDFGDARFV DDAPAGPFSI KDGILHITAR RDEAGKWRSG LLAASDGTGA
GFGLRYGYFE ARMRLPPGPG TWPAFWLGTK RPNTDKTPSI EIDVIEYYGH SDAAYSAALH
VWYKGEDKKR TTNTVQKIPV PAGSLLDDFH TYGVRVTPET ITYYLDRKPV WRRPTPPELD
KPLFPLVNLA LGSGFPIDRT PNPSVLLVDY VHVYAPDPEG RAARCPGH