| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpop_3305 |
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| Symbol | |
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| ID | 6311164 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium populi BJ001 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010725 |
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| Strand | - |
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| Start bp | 3531201 |
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| End bp | 3533102 |
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| Gene Length | 1902 bp |
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| Protein Length | 633 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 642652028 |
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| Product | Tetratricopeptide TPR_2 repeat protein |
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| Protein accession | YP_001925991 |
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| Protein GI | 188582546 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG5010] Flp pilus assembly protein TadD, contains TPR repeats |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.68435 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.412793 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCCCATGT TCGGATACGC CGCCCGCCGG AGCGCCACCG CGCTCACCCT GCTGCTCGCT
TCGACCGGTC TCGGCACTCT GCCGGCGGCG GCCATGCAGC CGCGGGAATC CTCGCCGCTC
TCCGAGTACG AGCCAGCGGA ATCGCTCGAA GGCAACTTCC TCTCCGCCTA TATCGCCGGC
GCCTCGAAGG ACACGGCGGC CGCCGCGAGC TTCTACCGCG AGGCGGTGAA GGGCGACCCG
CGCAACGCCG AACTCCTCGA GCGCGCCTTC GTGTCGCTGC TCGCCGACGG CGCGATGACC
GACGCGTTCC GCGCCGCCGA GCGGCTCGCC ACGCGGGAAA GCTCGAACGG CCTCGCCCAG
CTGGCGCTCG GCGTGCGCCA GCTCAAGGCT GGACAGTACG GTCCCGCCCG CCAGAGCTTC
GGCCGCAGCG GCCGGGGCGC GGCTGCCGAC CTCACCGGGA CACTGCTCAC GGCCTGGGCC
TATGCCGGCG CGGGCGACGG CAAGCGCGCC TACGAGACGT TGAACCGCCT GCGCGGCGAG
CGCTACTTCA ACGTCTTCCG TGACTACCAT GCCGGCCTGA TCGCCTCGGT CATCGGCGAC
CGGGGGGAGG CCGAGCGCAA GCTGAAGGCC GCCTACGACG CCGATCACAA CACCCTGCGG
ATCGTCGACG GCTATGCCCG CTTCGAGGCC GGCATCGGTC GCACCGATCT CGCCATCGAC
GCCTATAGCG AGTTCGAGAA GGTGATGCCG CGCCATCCCC TCGTGGTGGA CGCCCTCGAC
AAGCTCAAGG CCGGCAAGCC GCTCGCCCCG CTGATCGCCT CCGCTCAGGA GGGTGCGGCG
GAAGTCCTCT ACGGACTCGG CTCGGCCGGC TCGACCCAGG GCGACGAGCT TCCGGCGGTG
GTCTACCTGC GGCTCGCCCT CTACCTTGCT CCCGAGCACG CCGTGGCCCG GCTGACGCTT
GCCGACACGC TCGACCGCAT GAAGCAGACC GAGCGCTCGA ACGAGGCCTA CGCGCAGATC
CCGGCCTCCT CGCCGCTCAA GCTCAACGCC GACATCCAGA TCGGCCTCAA TCTCGAACAG
CTCGGCCGCG GCGACGAGGC GCTCCAGCAC CTCGACGCGG TGCTCAAGGC CCATCCCGAC
AACATCGACG TGATCTCGGC ACTCGGCAAC GTGCAGCGCG CCCGGAAGAA ATTCACCGAG
GCGACCGAGA CCTATACCCG CGCGATCAAC CTGATCGAGC CGGGCCGCGA GGCCAACAAC
TGGACGCTGT TCTACTTCCG CGGCACCGCC TACGAGCGGG CCGGCGAGTG GCAGAAGGCC
GAGGCCGACC TCAAGAAGGC GCTCAACCTC GTGCCGCCGA CGCAGCCGAA CGCCAAGGCG
CAGGTGCTCA ACTACCTCGC CTATTCCTGG GTCGATCGGA ACATGAACAT CGACGAGAGC
TTCACGATGC TGAAGCAGGC CGTCGATCTC TCGCCGCGCG ACGGCATGAT CATCGACAGC
CTCGGCTGGG CTTACTTCCG CCTCGGCCGC TGGGACGACG CGGTGCGCGA GCTGGAGAAG
GCGGTCGAGC TGAAGCCGGG CGATCCGACC ATCAACGACC ATCTCGGCGA CGCCTACTGG
CGCACCGGCC GCCGGCTCGA GGGCAAGTTC CAGTGGCAGC ACGCCAAGGA TCTGAACCCC
GAGCCGGACG ATCTCGCCAA AATCAACGCC AAGCTCAAGG ACGGCTTGCC CGAGCCGGAC
AAGCCCACGG CCACGGCCGA GAACCCGCCG ACCCAGGATC CGGCCCAGGC CGTGCCCGCC
CCCGTGGCGG CGCCGCACAA CCCGGAGAAC CCGGAACTGC CGAAGGGCGC GCCCGCGCCG
AGCGAGCCGC CGGGCGCGGC GGACAAGAAG CCGGGGAAGT AA
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| Protein sequence | MPMFGYAARR SATALTLLLA STGLGTLPAA AMQPRESSPL SEYEPAESLE GNFLSAYIAG
ASKDTAAAAS FYREAVKGDP RNAELLERAF VSLLADGAMT DAFRAAERLA TRESSNGLAQ
LALGVRQLKA GQYGPARQSF GRSGRGAAAD LTGTLLTAWA YAGAGDGKRA YETLNRLRGE
RYFNVFRDYH AGLIASVIGD RGEAERKLKA AYDADHNTLR IVDGYARFEA GIGRTDLAID
AYSEFEKVMP RHPLVVDALD KLKAGKPLAP LIASAQEGAA EVLYGLGSAG STQGDELPAV
VYLRLALYLA PEHAVARLTL ADTLDRMKQT ERSNEAYAQI PASSPLKLNA DIQIGLNLEQ
LGRGDEALQH LDAVLKAHPD NIDVISALGN VQRARKKFTE ATETYTRAIN LIEPGREANN
WTLFYFRGTA YERAGEWQKA EADLKKALNL VPPTQPNAKA QVLNYLAYSW VDRNMNIDES
FTMLKQAVDL SPRDGMIIDS LGWAYFRLGR WDDAVRELEK AVELKPGDPT INDHLGDAYW
RTGRRLEGKF QWQHAKDLNP EPDDLAKINA KLKDGLPEPD KPTATAENPP TQDPAQAVPA
PVAAPHNPEN PELPKGAPAP SEPPGAADKK PGK
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