Gene Mpop_3161 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpop_3161 
Symbol 
ID6310732 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium populi BJ001 
KingdomBacteria 
Replicon accessionNC_010725 
Strand
Start bp3394987 
End bp3395916 
Gene Length930 bp 
Protein Length309 aa 
Translation table11 
GC content69% 
IMG OID642651884 
ProductAuxin Efflux Carrier 
Protein accessionYP_001925848 
Protein GI188582403 
COG category[R] General function prediction only 
COG ID[COG0679] Predicted permeases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.303003 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGCGC TCACCCTCAT CATTCCGATC TTCGGCCTCG TTCTGGTCGG CTGGATCGCC 
TCGCTCACGG GGATCATCTC GGAGCGCGTC GGCGACGGCC TGTCGGAATA CGTCTTCTCG
CTCGCGGTGC CGGCGCTCAT CGTCTCGACG CTGACGCGGC CGGGCCTGTC GGGCGAAATC
GCCTGGGGCT ACTGGGCAAG CTATTTCGGC GGCGCGGCCA TCGCCTGGGC CACCGGCTCG
CTGATCGGGC GCCGCACCGA GGGCGTGGAC CGGCGCGGCG CGGTGCTGCA CGGCTTCGCC
GCGAGCCAGT CGAACACTGT CTTCGTCGGC GTGCCGATGA TCCTCCAGGC CTATGGCGAG
GCCGGGGCCT TCCCGCTGTT CATGCTGCTC GCCGTCCATC TGCCGCTGAT GATGGGGGCG
GCGACCTTCC TGATCGAATC GGAGGGCGGA CGCCCGCTCG GACAGCGGAT GAAGACGCTC
GGCCTCGTTC TCCTGAAAAA TCCGATCTTC CTGGCGCTCG CCGTCGGCAT GGCGATGAAG
GCCACGGGCC TCTCGCTCTC CGGTATCCCG AAGGCGCTGG TGGACTCGCT CGGCGGCACC
GCCTCGACCT GCGCGCTGAT CGCCCTCGGC GCCGGCCTGA CCCGCTACAA GGTGCTGCAC
GATCTGCCCG GCGCCAGCAT CGTCGCGGCC CTGAAGCTCG GGCTGCACCC GCTCGCGGTC
TATCTCTTGG CCTTTCACGT CTTCACCATG CCGCCAGCCT ATGCGGGCGT GGCCGTGCTG
TTCGCGGCGA TGCCGGTGGG CATCAACGCC TATCTGCTCG CCGCCCGCTA CAAGAGCGAA
CAGGGCTTGG TGGCCGCCGC CGTGCTGGTC TCGACGCTGG CCGCGACCGC GACCACGGTC
GGCTGGCTGA TGCTGCTCGG ACGGGGATAG
 
Protein sequence
MTALTLIIPI FGLVLVGWIA SLTGIISERV GDGLSEYVFS LAVPALIVST LTRPGLSGEI 
AWGYWASYFG GAAIAWATGS LIGRRTEGVD RRGAVLHGFA ASQSNTVFVG VPMILQAYGE
AGAFPLFMLL AVHLPLMMGA ATFLIESEGG RPLGQRMKTL GLVLLKNPIF LALAVGMAMK
ATGLSLSGIP KALVDSLGGT ASTCALIALG AGLTRYKVLH DLPGASIVAA LKLGLHPLAV
YLLAFHVFTM PPAYAGVAVL FAAMPVGINA YLLAARYKSE QGLVAAAVLV STLAATATTV
GWLMLLGRG