Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpop_3161 |
Symbol | |
ID | 6310732 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium populi BJ001 |
Kingdom | Bacteria |
Replicon accession | NC_010725 |
Strand | + |
Start bp | 3394987 |
End bp | 3395916 |
Gene Length | 930 bp |
Protein Length | 309 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 642651884 |
Product | Auxin Efflux Carrier |
Protein accession | YP_001925848 |
Protein GI | 188582403 |
COG category | [R] General function prediction only |
COG ID | [COG0679] Predicted permeases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.303003 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGGCGC TCACCCTCAT CATTCCGATC TTCGGCCTCG TTCTGGTCGG CTGGATCGCC TCGCTCACGG GGATCATCTC GGAGCGCGTC GGCGACGGCC TGTCGGAATA CGTCTTCTCG CTCGCGGTGC CGGCGCTCAT CGTCTCGACG CTGACGCGGC CGGGCCTGTC GGGCGAAATC GCCTGGGGCT ACTGGGCAAG CTATTTCGGC GGCGCGGCCA TCGCCTGGGC CACCGGCTCG CTGATCGGGC GCCGCACCGA GGGCGTGGAC CGGCGCGGCG CGGTGCTGCA CGGCTTCGCC GCGAGCCAGT CGAACACTGT CTTCGTCGGC GTGCCGATGA TCCTCCAGGC CTATGGCGAG GCCGGGGCCT TCCCGCTGTT CATGCTGCTC GCCGTCCATC TGCCGCTGAT GATGGGGGCG GCGACCTTCC TGATCGAATC GGAGGGCGGA CGCCCGCTCG GACAGCGGAT GAAGACGCTC GGCCTCGTTC TCCTGAAAAA TCCGATCTTC CTGGCGCTCG CCGTCGGCAT GGCGATGAAG GCCACGGGCC TCTCGCTCTC CGGTATCCCG AAGGCGCTGG TGGACTCGCT CGGCGGCACC GCCTCGACCT GCGCGCTGAT CGCCCTCGGC GCCGGCCTGA CCCGCTACAA GGTGCTGCAC GATCTGCCCG GCGCCAGCAT CGTCGCGGCC CTGAAGCTCG GGCTGCACCC GCTCGCGGTC TATCTCTTGG CCTTTCACGT CTTCACCATG CCGCCAGCCT ATGCGGGCGT GGCCGTGCTG TTCGCGGCGA TGCCGGTGGG CATCAACGCC TATCTGCTCG CCGCCCGCTA CAAGAGCGAA CAGGGCTTGG TGGCCGCCGC CGTGCTGGTC TCGACGCTGG CCGCGACCGC GACCACGGTC GGCTGGCTGA TGCTGCTCGG ACGGGGATAG
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Protein sequence | MTALTLIIPI FGLVLVGWIA SLTGIISERV GDGLSEYVFS LAVPALIVST LTRPGLSGEI AWGYWASYFG GAAIAWATGS LIGRRTEGVD RRGAVLHGFA ASQSNTVFVG VPMILQAYGE AGAFPLFMLL AVHLPLMMGA ATFLIESEGG RPLGQRMKTL GLVLLKNPIF LALAVGMAMK ATGLSLSGIP KALVDSLGGT ASTCALIALG AGLTRYKVLH DLPGASIVAA LKLGLHPLAV YLLAFHVFTM PPAYAGVAVL FAAMPVGINA YLLAARYKSE QGLVAAAVLV STLAATATTV GWLMLLGRG
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