| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpop_3080 |
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| Symbol | |
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| ID | 6311014 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium populi BJ001 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010725 |
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| Strand | + |
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| Start bp | 3304567 |
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| End bp | 3305112 |
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| Gene Length | 546 bp |
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| Protein Length | 181 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 642651806 |
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| Product | conjugal transfer protein precursor |
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| Protein accession | YP_001925770 |
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| Protein GI | 188582325 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4959] Type IV secretory pathway, protease TraF |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence
[TIGR02771] conjugative transfer signal peptidase TraF |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCGCC GCGGCTATGT CATCGCGACG TGTCTCGCCG TCATGGGGAC GACACTGGCG
TCGCTCGTTC CGGTTCCGCT TCGCCTGATC TGGAACGCTT CGGCCAGCGT GCCGATCGGC
TTCTATGACC TCGATCCTCC GGGTCATCTG GAGGTCGGAG ATCTGGTTGC GGTATTGCCG
GACAAGCCGC TCGCCGATTT CCTGGTCGAG CGCGGCTATA TCGGTCGCGA CGTGCCGCTG
ATGAAGCGCG TTATGGGGCT TGCCGGCCAG CGGGTCTGCC GCATCGGCAA CGCCATCACG
GTCGACGCGA TACCGCTTGG GCGTGCGCTC GACCGCGACC GGCGCGGACG TCCGCTGCCG
GTCTGGCAGG GCTGTCGCCG CCTCGCCGAC GGTCAGATTT TCCTCATGAA CCCCGATGTC
AGCGACAGCC TGGACGGCCG TTACTTCGGT CCGATCCCGG CGCGCGGCGT CATCGGCAAG
GCGACGCCGC TCTACACCGA CGAGGGTGGC GATGGCCGCT TCGTCTGGCG TGCCGCCACA
CGCTGA
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| Protein sequence | MTRRGYVIAT CLAVMGTTLA SLVPVPLRLI WNASASVPIG FYDLDPPGHL EVGDLVAVLP
DKPLADFLVE RGYIGRDVPL MKRVMGLAGQ RVCRIGNAIT VDAIPLGRAL DRDRRGRPLP
VWQGCRRLAD GQIFLMNPDV SDSLDGRYFG PIPARGVIGK ATPLYTDEGG DGRFVWRAAT
R
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