| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpop_2950 |
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| Symbol | |
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| ID | 6310617 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium populi BJ001 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010725 |
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| Strand | - |
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| Start bp | 3178610 |
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| End bp | 3180319 |
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| Gene Length | 1710 bp |
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| Protein Length | 569 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 642651676 |
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| Product | efflux transporter, RND family, MFP subunit |
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| Protein accession | YP_001925640 |
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| Protein GI | 188582195 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCATCC GTTTCACGAC GGTGCTCCAG GCGCTGGTCG TTTCGCTCGC GCTCGTGGTC
GGAGCGGCTA CGGGCGGCGG CGCGCGGGCG CACGAGGGGC ACAGCCACGG CGCCCAGGCA
CCGGCCCCCC CGGCGCAGGC CGCGCCCCGG GCCGAGGCGG TCTCCACCGA CTTCGAACTC
GTGGCCGTGG CCGCAGGCGA CCGGGTCCGG CTCTATCTCG ATCGCTTCGC CACCAACGAG
CCGGTGACGG GCGCCGACAT CGACGTCGAG ACGCCCGACG GCACCGTTGA GGCGAAGGCT
GTCGGTGACG GTGTCTACGA GATCGCGGCG CCGTGGCTGG CGCGCGGCCG GCGGCACGAT
CTTCTCGCCA CCGTGACCGC CGGGGGCACG ACGGACGTTC TCGCCCTCGA ACTTCACCTG
CCCGAACAGG CAGCGCCCGC CGTGGCCGTC CCGGCAGCGG CGCCGGCATG GCTCGCCAAC
CTGCGCCATC ACCTCACGCA TCAGGGGCCG GTCGGCGCCG CCGGGGGCGG CTTTCTGCTC
GGGCTCGCCT GCATCATGCT GCTGCGCGCG CGCCGCGCCC TGCCGGCTCT CGCGATCCTC
GCCCTTACCG TGACGCTGAT TCTCGGCACG GCCGCACTCG CCCATGAGGG GCACGACGCG
AACGAGAGCG CCCCGGTGCA GGGGGCGGCG CTCACCGCGC CTTCGGCCTC GAGCCTCGAG
CGCGCCCGGC GCCTGCCGGA CGGGGCGGTG TTCGTCCCGA AATCGGCGCA GCGCCTGCTC
GCGCTCCGCA CCGGCGTGAC CACCGTCGCC GAGCATCGCC GCACGGTCGA GTTGCCGGGG
CGCATCATCG CCGATCCGAA CGCCAGCGGC GTGGTGCAAT CCTCCGTCGG CGGACGCCTC
GCGCCCCCGC CCGGCGGCTT CCCGAATCTC GGCGCGCGGG TCCGCAGGGG CGACGTGCTC
GCCACCGTGA CGCCGCCGGT CCAGGCGGTG GACCTCTCCG ACATGCGCCA GACCCAAGGC
GATCTCGATC AGCAGATCGC CATCACCGGG CGCAAGGTCG CCCGCTACGA GCGCCTCGCC
ACCACCGGCG CCGTGGCGCA GACCGCGCTG GAGGATGCCC GCGCCGAACT GTCCGGCCTG
AAGGACCGCC GCGCCGCCCT CGACACGATC CGCCGCGCAC CGGAGGAACT CGTCGCCCCC
GTCGATGGCG TCGTCGCCGA GCGGGCTGCG GTGGCCGGCC AGATGGCCGC CCCGGGCACG
ATGGTGTTTC GCATCGTCGA TCCGGACAAG CTCTATGTCG AGGCCCTGAG CTTCGTCGGA
CTGGAACCCG GCGCCGCCGC CACGGCGCGG CTGCCCGATG GGCGCACCCT GGCGCTGGCC
TCCCGCGGAG CCGGCCTCGC CGACCGCAAC CAGGCGGTGC CGGTGCAATT CGCCATCACG
GGTTCGGCCG AGGGCGTGCG GCTCGGCCAG TTCGTCACCG TGCTGGCCCC GACCGGCGAA
ACGCTCGCCG GCCTTGCCGT GCCGCGGTCG GGCCTCGTCC GCACCGAGGG TGGCGCGGTC
GTCTACGAAC ACGTCGCCGC CGAGCGGTTC GAACCGCGGC CCGTGCGGGT CGAGCCGCTC
GACGCCGAGC ACGTGATCGT TGCCGGCGGC CTCGGGGCCG GACGACGCGT CGTCGTACAG
GGCGCCGAAC TGCTCGATCA GGTCCGCTGA
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| Protein sequence | MSIRFTTVLQ ALVVSLALVV GAATGGGARA HEGHSHGAQA PAPPAQAAPR AEAVSTDFEL
VAVAAGDRVR LYLDRFATNE PVTGADIDVE TPDGTVEAKA VGDGVYEIAA PWLARGRRHD
LLATVTAGGT TDVLALELHL PEQAAPAVAV PAAAPAWLAN LRHHLTHQGP VGAAGGGFLL
GLACIMLLRA RRALPALAIL ALTVTLILGT AALAHEGHDA NESAPVQGAA LTAPSASSLE
RARRLPDGAV FVPKSAQRLL ALRTGVTTVA EHRRTVELPG RIIADPNASG VVQSSVGGRL
APPPGGFPNL GARVRRGDVL ATVTPPVQAV DLSDMRQTQG DLDQQIAITG RKVARYERLA
TTGAVAQTAL EDARAELSGL KDRRAALDTI RRAPEELVAP VDGVVAERAA VAGQMAAPGT
MVFRIVDPDK LYVEALSFVG LEPGAAATAR LPDGRTLALA SRGAGLADRN QAVPVQFAIT
GSAEGVRLGQ FVTVLAPTGE TLAGLAVPRS GLVRTEGGAV VYEHVAAERF EPRPVRVEPL
DAEHVIVAGG LGAGRRVVVQ GAELLDQVR
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