| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpop_2709 |
|---|
| Symbol | |
|---|
| ID | 6309251 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium populi BJ001 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010725 |
|---|
| Strand | - |
|---|
| Start bp | 2928538 |
|---|
| End bp | 2929956 |
|---|
| Gene Length | 1419 bp |
|---|
| Protein Length | 472 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 642651431 |
|---|
| Product | DnaB domain protein helicase domain protein |
|---|
| Protein accession | YP_001925399 |
|---|
| Protein GI | 188581954 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0305] Replicative DNA helicase |
|---|
| TIGRFAM ID | [TIGR00665] replicative DNA helicase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 41 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAGGTAC CGAACCCCTA CAACATCGAA GCCGAGCAGC AGATCCTCGG CGCGCTCCTC
ATGCGCGACG AGATCTTCCA CGACATCGCC GGGGACGTGG AGGCCGATGA CTTCTACGAC
CGGCAGCACC AGACCGTCTT CCGGACGATC GCGCAGCTGG TCGACACCGG CAAGCGCGTG
AACGCGGCGA TCGTGCACGA CTTCGCCAAG AGCGGCGACA AGGGCACGAG CGTCGACCCG
GACTACATCG AGGTGCTGAT GGAGGGCGTC GCCGACCTGC GCGACACCAT CCACTACGCC
AAGCAGGTGC GCGATCTCGC GCGCCGGAGG CGATGGATCG CAGCTGCGGT CGACGGCATC
CAGGCGATCG GCCGGCTCGA CCCGCTCACC GAAGCGCAGA ACGCCATCGA CGAGGCCGAT
GTCCGGATCC TCAACTCGTC GAAGGTCGAC GTCAGCCACG TGCGCATGTT TGGCGAGTGG
GCTCAACTTG CGACCTCCCG CGCGATCGCG GCGATCGATT CACCGTCAGT CGCGACCAGC
GGTTTGAAAT GGGGGCTGAA CGCCGTCGAT CAGGTCGCGG GCCCGCTGAT GCCTGGCCAG
CTGGTCATTA AGGGTGGTCG ACCGGGATCT GGAAAATCCG CATTGGCCGG TCAAGCCGCC
GAGTTCTTCG GCAGTCAGGC GCCTGGCTTC ATCATGAGCC TAGAAATGGA GGGCGAGGAT
TGGGCGATTC GAGCCATGTC CGCGCACTCT GACCTACCGG CATGGCGCAT AGCGAATGCG
CGCATCAACG AGGATGAGGC CGGACGCCTC GACGAACTCG CGCGCCGAAT GAGAAGGCTT
CCGGTCTGGA TCGACCACAG TCCGCGAATG GACATCGAAA AGATCCGAGC CCGCGCCATC
CGCTACAAGC ACAAATTTGG GATCCGGTGG ATGATCGTGG ATCACCTCCA CATCATCGAA
CCAAGCTTCA AGCGCCAGGA GCGCGCCGAC ATCACGGCGA AAGCATCCGA GGAGCTGAAG
AAGATGGCGA AGGAACTCCA AATCGGGGTC GTCGCCCTCG CCCAGATGAA CAAGGAGGTC
CGGTCCCGAG ATGACGGGCG GCCGCGGTCG GGCGACCTCA TGTATTACAG CTCGATCGAG
CCCCACGCCG ACACGATCAT CTTCACGCAC CGGCCTGAGA TCGCGCACCT CGAGCGCAAG
CCGGACATGA CCGATCCCGA TTCGAAGGAT GCGGTCGCGT GGCGGGACAA GATGACCCTG
ATCGAGGGCC GCGCCGAGAT CATCAACGCC AAGCGCCGAC ACGGGAAGGC CTACCAGACG
CAGGCCTGCG AGTTCGTCGG CGAGACGATG CACTTCCGCG ACCTCGCCGC GAAGGAACTG
CCGCTCTCCG ACGCCTACGC TGAGATGAAG AGGTTCTGA
|
|---|
| Protein sequence | MQVPNPYNIE AEQQILGALL MRDEIFHDIA GDVEADDFYD RQHQTVFRTI AQLVDTGKRV
NAAIVHDFAK SGDKGTSVDP DYIEVLMEGV ADLRDTIHYA KQVRDLARRR RWIAAAVDGI
QAIGRLDPLT EAQNAIDEAD VRILNSSKVD VSHVRMFGEW AQLATSRAIA AIDSPSVATS
GLKWGLNAVD QVAGPLMPGQ LVIKGGRPGS GKSALAGQAA EFFGSQAPGF IMSLEMEGED
WAIRAMSAHS DLPAWRIANA RINEDEAGRL DELARRMRRL PVWIDHSPRM DIEKIRARAI
RYKHKFGIRW MIVDHLHIIE PSFKRQERAD ITAKASEELK KMAKELQIGV VALAQMNKEV
RSRDDGRPRS GDLMYYSSIE PHADTIIFTH RPEIAHLERK PDMTDPDSKD AVAWRDKMTL
IEGRAEIINA KRRHGKAYQT QACEFVGETM HFRDLAAKEL PLSDAYAEMK RF
|
|---|
| |