Gene Mpop_2404 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpop_2404 
Symbol 
ID6313435 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium populi BJ001 
KingdomBacteria 
Replicon accessionNC_010725 
Strand
Start bp2615479 
End bp2615961 
Gene Length483 bp 
Protein Length160 aa 
Translation table11 
GC content68% 
IMG OID642651133 
Producthypothetical protein 
Protein accessionYP_001925101 
Protein GI188581656 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG4964] Flp pilus assembly protein, secretin CpaC 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.817399 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCCGCC TGCGCCCTCA CCTCGTTCTG CTTCGTGCCG CCCCGGCCGC TCTGGCATGG 
CTGGCGCTCG CCGCGCCTGT CCTTGCGAAT GACCCTGCGC CTCAGGGGGC CGTCTCGGTG
CAGGTCGACA ACGCCAAGGT GATCCGCCTG CCGGAGAAAA CCCAGACCGT GGTGGTGGGC
AATCCGATGA TCGCCGACAT CACCCTGCAG AAGAACGGCG TCGTGGTGCT GACGGGCAAG
AGCTTCGGCA CGACCAACCT GATCGCGCTC GACGGCAGGG GCGCGATGCT CGCCGAATCG
ACCATCAGCG TACAGGCCGC GCAGGCCTCG ATCATCACGG TGCAGCGCGG CCTCGACCGC
GAATCCTATT CCTGCACGCC GAACTGCCAG CCGGCGGTGC AGCTCGGCGA CGCCAACAAG
TACTTCGACG AGACCAGCAA GCAGGCCGAG CAGCGCCGCA CGATGGCGAC CCAGGGTCGG
TAG
 
Protein sequence
MPRLRPHLVL LRAAPAALAW LALAAPVLAN DPAPQGAVSV QVDNAKVIRL PEKTQTVVVG 
NPMIADITLQ KNGVVVLTGK SFGTTNLIAL DGRGAMLAES TISVQAAQAS IITVQRGLDR
ESYSCTPNCQ PAVQLGDANK YFDETSKQAE QRRTMATQGR