Gene Mpop_2223 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpop_2223 
Symbol 
ID6309893 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium populi BJ001 
KingdomBacteria 
Replicon accessionNC_010725 
Strand
Start bp2376670 
End bp2377131 
Gene Length462 bp 
Protein Length153 aa 
Translation table11 
GC content71% 
IMG OID642650948 
Productnitrogen-fixing NifU domain protein 
Protein accessionYP_001924920 
Protein GI188581475 
COG category[C] Energy production and conversion 
COG ID[COG0822] NifU homolog involved in Fe-S cluster formation 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.0507032 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGACG ACATCTACAA CCGCCGCATC CTGGAACTCG CCGCCGACAT CCCCCGCCTC 
GGCCGGCTGG AGGCGCCGGA CGCCACCGCC ACCGCCCATT CCAAGCTCTG CGGCTCGACC
GTGACCGTCG ATCTCAAGCT CGACGCGGAC GGCGTCACGA TCGCCGATTT CGCCCATGAC
GTGAAAGCCT GCGCGCTCGG TCAGGCCTCC TCCTCGCTCA TGGCCCGCCA TGTCGTCGGC
GCGAGCGCGG ACGAATTGCG CGCGGTCCGC GCCCGGATGC GGGCGATGCT GAAGGAGAGC
GGGCCGGTCC CGGAGGGGAA ATGGGCCGAC CTCGCCGTAC TGGAGCCGGT GCGGGACTTC
CGCGCCCGGC ACGCCTCGAC GCTGCTGACC TTCGACGCGG TGGTGGACGC CCTCGATCAG
ATCGCCGCGC GGACGAATTC CGGCGCGCCC GAAGCGGCCT GA
 
Protein sequence
MIDDIYNRRI LELAADIPRL GRLEAPDATA TAHSKLCGST VTVDLKLDAD GVTIADFAHD 
VKACALGQAS SSLMARHVVG ASADELRAVR ARMRAMLKES GPVPEGKWAD LAVLEPVRDF
RARHASTLLT FDAVVDALDQ IAARTNSGAP EAA