| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpop_1998 |
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| Symbol | |
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| ID | 6310098 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium populi BJ001 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010725 |
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| Strand | - |
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| Start bp | 2142712 |
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| End bp | 2144685 |
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| Gene Length | 1974 bp |
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| Protein Length | 657 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 642650722 |
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| Product | polysaccharide biosynthesis protein CapD |
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| Protein accession | YP_001924696 |
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| Protein GI | 188581251 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1086] Predicted nucleoside-diphosphate sugar epimerases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.140025 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGAAGC GCACCCTCAA GACGGCGGTG ATGGTCGTCC ACGATCTCGC CGCGACCGCG
GCGGCCGTGG TGCTGACCTT CGTCTTCCGC TTCCAGGACG GAGCGCTCGC CGAGCGCCTG
CAGGCGCTGC CGCTGCTGCT GCCGCCGTTC CTGGCCTATG CCGGGCTGAT CTACGCGTGG
TTCCGGCTCT ACCGCACCAA GTGGCGCTTC GCCTCGCTGC CGGACCTCGC CGGCATCGTG
CGCGCGGCGA GCGTCACCGC GTTGACGCTG CTCGTGCTCG ATTACGTGCT GGTCTCCTCG
AACCTCTACG GCTTCTACTT CTTCGGCAAG GTCGCCATCG CCCTCTACTG GGTCCTGCAG
ATCTTCCTGC TCGGCGGCCC GCGGCTGGCC TTCCGCTACC TGAAATACGC CCGCTCCCGG
CAGAGCCAGG CACGGGCCGC CACCACGCCG ACGCTGCTGC TCGGCCGCGG CACCGACATC
GAGATCGTGC TGCGGGCGAT CGAATCCGGC TCGGTCAAGC GGCTGTCGCC CAAGGGCATC
CTCTCGCCGC GGGCGGACGA GGCGGGCCAG ATGATGCGCG GCGTGCCCGT GCTCGGCGGG
TTTCGCGACC TGGAGCAGGT CGTGGCGGAT CTCGCCAATC GCGGCCTGCC GGTGCGCCGG
CTCGTGGCGA CGCCGAGCGC CCTGGCGCCC GAATCCGAGC CCGACGACCT CATCGCCCGC
GCCCGCCGGC TCGGCCTGCC GCTCGCGCGC GTCACCAGCC TCGGCGAGGG AATGCGCGAC
GCCGAACTCG CGCCTCTCGA GATCGAGGAT CTGCTCCTAC GCCCCACCGT CGCCATCGAT
CGGCCGCGAC TGGAAAACTT CCTGACCGGC GCCCGCGTGG TCGTGACCGG CGGCGGCGGC
TCGATCGGCT CGGAGATCTG CGCTCGGGCG ATCGCCTTCG GCGCCGCGGC GCTGCTCGTC
ATCGAGAATT CGGAGCCGGC GCTCCACGCC GTCCTCAACG GCCCGGCCCT GCTCCACGCG
GAGGCGGAGG TGCAGGGCGC GCTGGCCGAC ATCCGCGACC GCGAGCGGCT GCACGCGATC
ATCCGCGATT TCCGGCCCAC TTACGTCTTC CATGCCGCCG CGCTGAAGCA GGTGCCCTAT
CTCGAGCGCG ACTGGGCCGA GGGCATCAAG ACCAACGTCT TCGGCTCGAT CAACGTCGCC
GAGGCCACCG TCGCGGCGGG CGCCCGCGCC CTGGTGATGA TCTCCACCGA CAAGGCGATC
GAGCCGGTCT CGCAGCTCGG CGTCACCAAG CGCTTCGCCG AGATGGTGGC GCAATCCCTC
GATGCGGAGC GCGCCGGCCC GGAGGCGACC CGGCTCATCG CCGTGCGCTT CGGCAACGTT
CTCGGCTCGG CCGGCTCCGT GGTGCCGGTG TTCAAGGCGC AGATCGCCCG CGGCGGACCG
GTCACGGTCA CCCACGCCGA GATGGTGCGC TACTTCATGA CCGTGCGCGA GGCCTCCGAC
CTCGTGCTCA CCGCCGCCTC CCACGCCGAC GCGGAAGGCC GCGGCGATAC CGGCGACCAG
CGCGCGGCGG TCTACGTGCT GAAGATGGGC CAGCCGGTGC GCATCCGCGA TCTGGCCGAG
CGGATGATCC GGCTCGCGGG CTTCGAGCCG GGCGAGGACA TCGAGATCCA GGTCACCGGC
GCGCGGCCGG GCGAGCGCCT CAACGAGATC CTCTTCGCCA AGGAAGAGCC GCGGGTGACG
CTCGCCGGCA TCGACGGCGT CATGGCGGCC AAGCCCGTCT TCGCCGACCG CGCCGTGCTG
GAGACTTGGA TTCTTCGCCT GCGCGACGCG GTGGCCGCCG GGGATCGGGC CGCGGCGGAC
GCCGTGTTCG AGGAGGCGAT CCCGGATTTC CGCAACCGGG CCGGGGCCGT TCCGAACGCG
CAGCCCGGGA GCATCGCGCC GCCGGCTCAG GCCGCTGTGG CGGCGACCGC CTGA
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| Protein sequence | MQKRTLKTAV MVVHDLAATA AAVVLTFVFR FQDGALAERL QALPLLLPPF LAYAGLIYAW
FRLYRTKWRF ASLPDLAGIV RAASVTALTL LVLDYVLVSS NLYGFYFFGK VAIALYWVLQ
IFLLGGPRLA FRYLKYARSR QSQARAATTP TLLLGRGTDI EIVLRAIESG SVKRLSPKGI
LSPRADEAGQ MMRGVPVLGG FRDLEQVVAD LANRGLPVRR LVATPSALAP ESEPDDLIAR
ARRLGLPLAR VTSLGEGMRD AELAPLEIED LLLRPTVAID RPRLENFLTG ARVVVTGGGG
SIGSEICARA IAFGAAALLV IENSEPALHA VLNGPALLHA EAEVQGALAD IRDRERLHAI
IRDFRPTYVF HAAALKQVPY LERDWAEGIK TNVFGSINVA EATVAAGARA LVMISTDKAI
EPVSQLGVTK RFAEMVAQSL DAERAGPEAT RLIAVRFGNV LGSAGSVVPV FKAQIARGGP
VTVTHAEMVR YFMTVREASD LVLTAASHAD AEGRGDTGDQ RAAVYVLKMG QPVRIRDLAE
RMIRLAGFEP GEDIEIQVTG ARPGERLNEI LFAKEEPRVT LAGIDGVMAA KPVFADRAVL
ETWILRLRDA VAAGDRAAAD AVFEEAIPDF RNRAGAVPNA QPGSIAPPAQ AAVAATA
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