| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpop_1956 |
|---|
| Symbol | |
|---|
| ID | 6308979 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium populi BJ001 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010725 |
|---|
| Strand | - |
|---|
| Start bp | 2090517 |
|---|
| End bp | 2091713 |
|---|
| Gene Length | 1197 bp |
|---|
| Protein Length | 398 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | 642650680 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001924654 |
|---|
| Protein GI | 188581209 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG5330] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.409971 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.086997 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAGGACC AGACGCCGGG CGGCCGCCCC GGCCCGCAGC ACCCCTACGC GCGAGCGCGC
CTCAACGACC TCGTCCGGCG CATCGAGGAC GCCCTGCGCA GCGGTGACGC GGCGCTCCAA
TCCAGGCTCG TGCTGCAATC GGCGCAGCTG CTGACCAAGC GCTGGTCGCG CCTTCCGCCG
CCGGACAAGC CCGCCTTCGA CGGGCTGCTC GTGACCCTGT GCGGCCAGAT CGATGCGGCG
GCGCGCCGGG CCTTCGCCGA GCAGCTCGCC CCGTTGCGCC TCGGGCCGCC GCGCACCTCG
CAGGTGCTCG CCCGGGATGC CTCGATCGCG GTCGCGGCAC CGCTCCTGGC GGGCTGTTCC
AGCCTCGGCG ACGACATCCT GGCCGAGGTC GCGGCCTCGG GGAGCGACGA GCACCGTTGT
GCCGTCGCCG CGCGGCCGAC CGTGCCTCCG GATCTGACGG ATCGGCTCTT GCGTCACGGC
GACGGTCGCG TCGCCGCGCG GCTGCTCGAC AATCCGGGCG CCGGCTTCTC AGAGGCCGGT
TTAGCCGGCC TGATGACGCA GTCCGCGCGA GCCGAGCCGG TGACGCTGCG TCTCGCCCGC
CGGCCGGACC TGCCGCCCGG GCTCGCCCCG GCGCTTCTCG CGCAAACGCG CCGACGGGCC
GCCGAGGCGC TGGAAACCGA CCTCGCCGAT GATCGCGCCG GGCTGGATCG CCTGCTGGAC
AGGGCGGCGG GCACCCTGGC CCAGCCGGTG GCGGAAGACC GCGTGGCGCG CTTTCGCGCC
TCGCGCGACA TCATCGGCCG CCGGTTCGCG GGCGCCGGCC GAGGCCCGAA CGCGTCCGAA
CTCGAACGCT GGCTGACCCT GAACCGCATC GAGGACGGAC TCGCCGCCAT CGCCCACGCG
GCCGGCCTCC CGCTGCCCGC AACCATCGCC GCCTTCGATG CGCCTGCGCC GGCGGCACTC
GCCGCGATCC TGCGCGGGCT CGATCATCCC TGGGCGGTGC AGAAGGCCCT GCTCTCCCAG
CGCTTCGGCG AGACGCTTCC TCCCGAAGCG GTGGACGAGA GCTGGTGGCT TCACCGGCGC
CTTCGGCCCG CCACAGCGCG CCGCCTGATC CGCTTCGCGG CGATGCCTCT GGGCTGCGCG
GCCTTCCTCG ACGAGGCCGA GGCGGATGAC CGCGGCTCAA GCGGAGACGG GCCGTAG
|
|---|
| Protein sequence | MQDQTPGGRP GPQHPYARAR LNDLVRRIED ALRSGDAALQ SRLVLQSAQL LTKRWSRLPP
PDKPAFDGLL VTLCGQIDAA ARRAFAEQLA PLRLGPPRTS QVLARDASIA VAAPLLAGCS
SLGDDILAEV AASGSDEHRC AVAARPTVPP DLTDRLLRHG DGRVAARLLD NPGAGFSEAG
LAGLMTQSAR AEPVTLRLAR RPDLPPGLAP ALLAQTRRRA AEALETDLAD DRAGLDRLLD
RAAGTLAQPV AEDRVARFRA SRDIIGRRFA GAGRGPNASE LERWLTLNRI EDGLAAIAHA
AGLPLPATIA AFDAPAPAAL AAILRGLDHP WAVQKALLSQ RFGETLPPEA VDESWWLHRR
LRPATARRLI RFAAMPLGCA AFLDEAEADD RGSSGDGP
|
|---|
| |