| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpop_1886 |
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| Symbol | |
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| ID | 6312742 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium populi BJ001 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010725 |
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| Strand | + |
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| Start bp | 2020151 |
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| End bp | 2021872 |
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| Gene Length | 1722 bp |
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| Protein Length | 573 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 642650610 |
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| Product | efflux transporter, RND family, MFP subunit |
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| Protein accession | YP_001924584 |
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| Protein GI | 188581139 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACCTTCT TCAAGACCGA CGCCCACGCT CGGCCGCGAG GCCGTGCTGC CGGGCTGGCC
ATGCTGATCT TGGCCACCGG CCTCGCCGCG CCTGCGCTCG CCGGTGGAGG CGACGACCAC
AGCCACGGGC CGGCGCCGGC TGCCGCGGCC GCGGAGGGCA CGCCCCGCGT CGCCATGCAG
TCCGACCTCT ACCAGGTGGT CGGCATCCTC AAGGGCGACC GCCTGACGCT CTACGTCGAC
CGGTCCGAGG ACAACGCGCC GGTGACCGGC GCGACCGTGT CCGTGACGGT CGAGGGCGAG
GCCGTGCCGG CCGTGGCGAA CGCCGATGGG ACCTACGCCG TCTCCTCGCC GCACCTGGCG
GAGCCCGGCT CGAACGACCT CGTCATCCAG GTCGCCGGCC CCGACGGCGA GGACCTCCTG
ATCGGATCCC TGGTCGTGGC CGGGCCGAGC CGTCCGGCGG CCCAAGCAGA GGCGCCGCAT
CCGCATGCCG GCATGCCGCT CCTGGCTCAC TTGAAGGAAA GGCTCGGACA GGCCGAGCCG
GCCCGGGCCT GGGCGCTCGC CGTCTTCGCG GTCGGCCTGG CGCTCGGGCT GGCCCTGCGC
AGCCGCCGCA TGCGGCCGGC CGCATTCGTG GCCGGCGCCG TCCTCGTGGT CGCCCTGACG
GGCACCGCCT TCGCCCACGG CGGCGAGGAT CACGACCACG ACGCGCCCGC CGCGACGCCG
GGCTCGAACA CCCCGCAGCG CCTGCCGGAC GGGTCGGTCT TCGTCCCCAA ACCCTCGCAG
CGCATCCTGG AGGTGCGCAC CACGACCGCC AAGCTGACCG AGGTCGAGGG TGCGACCCGC
CTCATCGGCA AGGTCATCCC CGACCCGAAC CGGGGCGGGC TGGTGCAGAG CATCGGCGGC
GGCCGGGTCA TCGCGCCCGA GGCCGGCATG CCCCGGCTTG GGCAGGCCGT GCGCAAGGGC
GAGGTGCTCG CCCGGGTCGA GCGGCCCATC ATTCAGGCCG ACCAGGCCAT CGTGGTCGAG
AAGGTCGGCG AGATCGAGCA GCAGATCGGC CTCGCCGAGG CGAAGCTCGC CCGCGCCCGG
AAGCTCGTCG CCTCGGGCGC CGGCACGGCC ATCTCCGTCT CCGACCTGGA GATCGAGCTG
GAGGGCATGC GCCGGCGCCG GGCCGCCGTG AGCGACATCC GCACCACGCC CGAGACCCTG
ACGGCGCCCG CCGACGGCGT CATCGCCACG ACCCGCGTCG CCGCCGGCCA GGTCGTGCAG
CCGCAGGACG TCCTTTTCCA GGTGGTCGAC CCCGGGAGCC TCTGGGTCGA GGCGCTCTCG
TTCGAGGATG CGCCGACCGG CACGAAGACC TCCGCCGTCA CCGCCGACGG CACCACCCTG
ACGCTCCAGG CGAAAGGTGT GAGCCGCGCC CTGCAGCAGC AGGCGACCGT GCTCCAGTTC
GCGGTGGTCG ACCCGCCCGC CGGCCTGAAG GTCGGCCAAC CGGTGACGGT GCTCGCCGCG
ACCGGGGCCA GCGCCGCCGG CATCGTCCTA CCCCGTAACG CCGTCGTGCG CGGGACCGGC
GGCGAGGCCA TGGTCTGGCG CCACGCCGCG CCCGAGCGGT TCGAACCGCG TCAGGTCCGG
GTCGAGCCGG TCGATGCCAC GCGGGTGGTG GTCCGCGCTG GCGTGAAGGA GGGCGAGCGC
GTCGTCGTGC GCGGCGCCGA CCTCATCAAC CAGATCCGGT GA
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| Protein sequence | MTFFKTDAHA RPRGRAAGLA MLILATGLAA PALAGGGDDH SHGPAPAAAA AEGTPRVAMQ
SDLYQVVGIL KGDRLTLYVD RSEDNAPVTG ATVSVTVEGE AVPAVANADG TYAVSSPHLA
EPGSNDLVIQ VAGPDGEDLL IGSLVVAGPS RPAAQAEAPH PHAGMPLLAH LKERLGQAEP
ARAWALAVFA VGLALGLALR SRRMRPAAFV AGAVLVVALT GTAFAHGGED HDHDAPAATP
GSNTPQRLPD GSVFVPKPSQ RILEVRTTTA KLTEVEGATR LIGKVIPDPN RGGLVQSIGG
GRVIAPEAGM PRLGQAVRKG EVLARVERPI IQADQAIVVE KVGEIEQQIG LAEAKLARAR
KLVASGAGTA ISVSDLEIEL EGMRRRRAAV SDIRTTPETL TAPADGVIAT TRVAAGQVVQ
PQDVLFQVVD PGSLWVEALS FEDAPTGTKT SAVTADGTTL TLQAKGVSRA LQQQATVLQF
AVVDPPAGLK VGQPVTVLAA TGASAAGIVL PRNAVVRGTG GEAMVWRHAA PERFEPRQVR
VEPVDATRVV VRAGVKEGER VVVRGADLIN QIR
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