Gene Mpop_1714 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpop_1714 
Symbol 
ID6313664 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium populi BJ001 
KingdomBacteria 
Replicon accessionNC_010725 
Strand
Start bp1846094 
End bp1848859 
Gene Length2766 bp 
Protein Length921 aa 
Translation table11 
GC content70% 
IMG OID642650437 
ProductCheA signal transduction histidine kinase 
Protein accessionYP_001924412 
Protein GI188580967 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0643] Chemotaxis protein histidine kinase and related kinases
[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACGATC TGCTTCGCGA GTTTCTGGTC GAGAGCGCCG AGCATCTGGA CACGGTCGAT 
GCGGAGCTGG TCCGTTTCGA GCAGGATCCC AACAACCAGC AGATCCTGCG CAACATCTTC
CGGCTCGTCC ACACCATCAA GGGCACCTGC GGCTTCCTCG GGCTGCCGCG GCTCGAAGCG
CTGGCGCACG CGGCCGAGAC GCTGATGGGG CGCTTCCGCG ACGGCTATCC CGTCAGCGGC
GCCTCGGTCA CCCTGATCCT CGCCACCCTC GACCGGCTCA AGGCGATCCT CGCCGATCTC
GAAGCGACCG GCTCCGAGCC CGCCGGCGCC GATGCCGACC TGATCGGCGC CCTGGAGGCG
ATGGCCTCCG AGGAGGCGCC CGCCGCCGCG GCTCCGCCGC CCCCGCCGCT GCCCGATCTG
CCGCCGATCG TGGAGCGTGA GCTGAAGCCC GGCGAGGTCT CGCTGGAAGA CCTGGAGCGC
GCCTTCATGG AAGCGCCCGG CCCCGACGAC TTTTCCGCTC CGGCCGCTCC CGCGCCCGTC
TCTGCGCCGG CCCCCGCGCC CGCGATCGAG CCTGTCCTCG AAGCCGCCGA GCCCGATTTC
GAGAGCGCGC CGGAGCCGAC GGCACCCGCC CAGGCTCACG AGCGCCCCGC GGCCACGGCG
CCCGTGTCCG AAGGAAGCGG TGAAGGCCCG GTGGCCAAGG TTCAGACGAT CCGCGTGAAC
GTCGACACCA TCGAGCACCT GATGACGATG GTCTCGGAAC TGGTGCTGAC CCGCAACCAG
CTCCTCGAGA TCGCGCGCCG CCACGAGGAT TCCGGCTACA AGGTCCCGCT CCAGCGCCTC
AGCCACGTCA CGGCCGAGCT GCAGGAAGGC GTGATGAAGA CGCGCATGCA GCCGATCGGC
AATGCGTGGC AGAAGCTGCC CCGCGTCGTG CGCGACCTCT CGGCCGAACT CGGTAAGGGC
ATCGACCTCG TGATGTCGGG GGCCGAGACC GAACTCGACC GCCAGGTGCT CGACGTCATC
AAGGACCCGC TCACCCACAT GGTGCGCAAC TCGGCCGACC ACGGCATCGA GGCCACCAAC
GAGCGCCTCA AGGCCGGCAA GCCCGCCCGC GGCTCGATCC GCCTCTCCGC CTATCACGAG
GGCGGCACGA TCACGATCGA GATCGCCGAC GACGGCAAGG GCCTCGACCT CGCCGCGATC
CGCAAGAAGG CGATCGAGCG CAACCTCGCC CCCGCCGCCG ACGTCGAGCG GATGACCGAC
GCGCAGGTCG CGAAGTTCAT CTTCCACGCC GGCTTCTCGA CCGCCAAGGC GGTGACCTCG
GTCTCCGGCC GCGGCGTCGG CATGGACGTG GTCAAGACCA ATATCGAGAC CATCGGCGGC
GTGGTCGACA TCGCCACCGA ACTCGGCAAG GGCACGACCT TCACCATCAA GATCCCGCTG
ACGCTCGCCA TCGTCTCGGC GCTGATCGTC AAGGCCGGGG AGCAGCGCTA CGCCGTGCCG
CAGATCGCGG TGCTGGAGCT GGTGCGGGTC GATCCCAAGG ACGAGAACAA GAGCACGAAC
TCGATCGAGC GCATCCACGG CGCGCCGGTG CTGCGCCTGC GCGAGCGGCT CCTGCCGATC
GTCACCCTCG ACGGGCTGAT GCGCGGACAG GCGATCGCCG AGGAGAGCGA GATCGTCGAG
TCGGGCTTCG TGGTGGTGGC CCAGGTCGGC CGGCAGCGCT TCGGCGTGCT CGTCGACGAG
GTCTTCCACA CGGAAGAGAT CGTCGTGAAG CCGATGTCGT CGAAGCTGCG GCACATCCCG
CTGTTCGCCG GCAACACGAT CCTCGGCGAC GGCGCGGTGG TGCTGATCGT CGATCCCAAC
GGCGTGGCCA AGCTGGTGGG CCAGAGCGCC CAGTCCGGCG CGGCGACGGA GGCCGAGACC
GAGGAGGTCG AGGCCGGCGA CGCCAAGGCG ACGCTCCTCG TGTTCAAGGG CGGCGCGGGC
GGCTTCAAGG CGGTTCCGCT CTCCCTCGTC ACCCGGCTGG AGGAGATCGA CGCCTCGAAG
ATCGAGCATC TCGGCGGGCG CCCGCTGATC CAGTACCGCG GCCGCCTCAT GCCGCTGGTG
CCGGCCGATC CGGGCATCGC GATCCGCTCC GAGGGCAGCC AGGCGCTCGT CGTGTTCTCC
GACGGCGACC GGGCCATGGG CCTCGTGGTC GACGAGATCG TCGACATCGT CGAGGAGCGC
CTCGACATCG AGATCTCGGC CGATCGCTCC GACCTCATCG GTTCGGCGGT GCTGCGGGGC
CGGGCGACCG ACATCATCAA CATCGCCCAC TTCCTGCCGC TCGCCTACGA CGACTGGGCG
CGGGGCCCGC GCAAGACCGT GGTCAAGGCG CCCTCGCTCC TGCTGGTCGA TGACTCGGCC
TTCTTCCGCG ACATGCTGAC CCCGGTGCTC AAGGCCGCCG GCTACAGCGT GACCACCGCG
GCCTCCGCCG ACGAGGCGCT CGGCCTGCTC AAGGGCAATG CCGGCATCGA CCTCGTGGTC
AGCGACCTCG ACATGCCCGG CCGCAGCGGC TTCGACCTCG TCGCCGCCAT GCGCGGGACC
GGGGGGCGGC TGGCCGAGAT GCCGGTGATC GCGCTGACCG GGACGGTCGC CGCCGATGCC
ATCGACCAGG CCCGCCGCCT CGCCATCAGC GACCTCGTCG CCAAGTTCGA CCGCAGCGGC
CTGCTCGCGG CGCTCGCCGA GATCGGCGAG GCCGGCCAGC CCGCCGACAC CCGCGCCGCC
GCCTGA
 
Protein sequence
MDDLLREFLV ESAEHLDTVD AELVRFEQDP NNQQILRNIF RLVHTIKGTC GFLGLPRLEA 
LAHAAETLMG RFRDGYPVSG ASVTLILATL DRLKAILADL EATGSEPAGA DADLIGALEA
MASEEAPAAA APPPPPLPDL PPIVERELKP GEVSLEDLER AFMEAPGPDD FSAPAAPAPV
SAPAPAPAIE PVLEAAEPDF ESAPEPTAPA QAHERPAATA PVSEGSGEGP VAKVQTIRVN
VDTIEHLMTM VSELVLTRNQ LLEIARRHED SGYKVPLQRL SHVTAELQEG VMKTRMQPIG
NAWQKLPRVV RDLSAELGKG IDLVMSGAET ELDRQVLDVI KDPLTHMVRN SADHGIEATN
ERLKAGKPAR GSIRLSAYHE GGTITIEIAD DGKGLDLAAI RKKAIERNLA PAADVERMTD
AQVAKFIFHA GFSTAKAVTS VSGRGVGMDV VKTNIETIGG VVDIATELGK GTTFTIKIPL
TLAIVSALIV KAGEQRYAVP QIAVLELVRV DPKDENKSTN SIERIHGAPV LRLRERLLPI
VTLDGLMRGQ AIAEESEIVE SGFVVVAQVG RQRFGVLVDE VFHTEEIVVK PMSSKLRHIP
LFAGNTILGD GAVVLIVDPN GVAKLVGQSA QSGAATEAET EEVEAGDAKA TLLVFKGGAG
GFKAVPLSLV TRLEEIDASK IEHLGGRPLI QYRGRLMPLV PADPGIAIRS EGSQALVVFS
DGDRAMGLVV DEIVDIVEER LDIEISADRS DLIGSAVLRG RATDIINIAH FLPLAYDDWA
RGPRKTVVKA PSLLLVDDSA FFRDMLTPVL KAAGYSVTTA ASADEALGLL KGNAGIDLVV
SDLDMPGRSG FDLVAAMRGT GGRLAEMPVI ALTGTVAADA IDQARRLAIS DLVAKFDRSG
LLAALAEIGE AGQPADTRAA A