| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpop_1489 |
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| Symbol | |
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| ID | 6313751 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium populi BJ001 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010725 |
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| Strand | - |
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| Start bp | 1603597 |
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| End bp | 1604433 |
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| Gene Length | 837 bp |
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| Protein Length | 278 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 642650214 |
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| Product | shikimate 5-dehydrogenase |
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| Protein accession | YP_001924190 |
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| Protein GI | 188580745 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0169] Shikimate 5-dehydrogenase |
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| TIGRFAM ID | [TIGR00507] shikimate 5-dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.06753 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAGCCA GGGCCTTCGT CGTCGGCCAC CCGATCCGGC ATTCCCGCTC GCCGCTGATC
CACGGCCACT GGCTCGCCGA GCACGGGCTC GCCGGCACCT ACGAGCGCCT CGACGTAGCG
CCGGACGACT TCGCGGCGTT CTTTCGCGCA CTGCCCGCCT CGGGATTCGC CGGCGGCAAC
GTCACGATCC CACACAAGGA GGCGGCCTTC CGCCTCGCCG ATTCCCTGAC GGAGCGCGCA
AAAAAGATCG GGGCGGTGAA CACGCTGATC GTCGAGGGCG GCCGGGTGCG CGGCGACAAC
ACCGATGCGC CGGGCTTCAT CGCCCATCTC GACCGGAGTC TCGGGGAAGG CTGGCCCGAG
CGGACCGGCG GGACCGCCCT CGTGCTCGGC GCGGGCGGCG CGGCGCGGGC CATCGTCGTC
GGGCTGGTGG AGCGGGGGAT GCGGGTCCGG GTCGCCAACC GCAGCCCCGA GCGGGCGCGG
GCGCTCGCCG AACTCGACCC CGGCCATGTC GAGGCGCTCG CCTGGGAGGC GGTGCCGGCG
GCGCTCTCCG AGACCGGACT CCTCGTCAAC ACCACTTCGC TGGGCATGGC CGGTCACCCG
CCGCTCGCGC TCGACCTCGC CCCGCTTCCC GAACGCGCGG CGGTGGCCGA CATCGTCTAC
GTGCCGCTGG AGACGCCGCT GCTCGCCGCG GCGCGGGCGC GCGGGCTCGC GGCGGTGGAC
GGGCTCGGCA TGCTGCTGCA CCAGGCGGTG CCGGGTTTCT TCGCGTGGTT CGGCCTGCGC
CCCGAGGTGA CGCCGGAACT GCGTGAGAAA ATCGTCGCGG ATCTCGTCGC GCGATGA
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| Protein sequence | MTARAFVVGH PIRHSRSPLI HGHWLAEHGL AGTYERLDVA PDDFAAFFRA LPASGFAGGN
VTIPHKEAAF RLADSLTERA KKIGAVNTLI VEGGRVRGDN TDAPGFIAHL DRSLGEGWPE
RTGGTALVLG AGGAARAIVV GLVERGMRVR VANRSPERAR ALAELDPGHV EALAWEAVPA
ALSETGLLVN TTSLGMAGHP PLALDLAPLP ERAAVADIVY VPLETPLLAA ARARGLAAVD
GLGMLLHQAV PGFFAWFGLR PEVTPELREK IVADLVAR
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