| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpop_1404 |
|---|
| Symbol | |
|---|
| ID | 6309718 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium populi BJ001 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010725 |
|---|
| Strand | - |
|---|
| Start bp | 1524922 |
|---|
| End bp | 1526337 |
|---|
| Gene Length | 1416 bp |
|---|
| Protein Length | 471 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 642650130 |
|---|
| Product | integral membrane sensor signal transduction histidine kinase |
|---|
| Protein accession | YP_001924106 |
|---|
| Protein GI | 188580661 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0642] Signal transduction histidine kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.102052 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGACC GCCTCGCCTG GCTCCCCTTG CGCCGCCGCT CCATCGCGGT CCGGCTCGCG
GTCTCCTCGT TCCTGTCGAG CACCGCGATC CTCGTCATCG CGGCCTTCAT CCTCACCACG
CTCTACCGCG AGAACACCGA GCGCGCCTTC GACAGCCGCC TGCTCGTCTT CGCCAACAAC
CTCGCCACCG ATCTCGTCAG CCCGAGCGAT CCCGAGACCC GCTCCTTCTC GCTCGGCGAC
CCGCGCTTCG ATCTGCCCCT GTCGGGCTGG TACTGGCAGG TCGGGCGACC CGACGCGAAG
CCGCGGGACC TGCGCACCTC GCGCTCGCTC GTCGGCGTGC CGCTGAAAGG GCCCGATCAG
GCCGGCACCG CCACCATCGG TCAGATCCGC CAGGGCTACG GCAAGGGACA GGACGACCGG
ACGCTGCGCA TCGTCGAGCG TGACGTCGAT GTCGGGGCGG ACGGGCGCTA TACCGTGCGG
GTGGCGGGGC CGGCCGACGA GATCGTCAAC GATGTCGAGC GCTTCCGCTT CTCGCTGTTC
ATGACCTTCG GTCTGCTCGG CTTCTCGCTC GCGGCCACGG CCTTGCTGCA GATCCGCTTC
GGCCTCGCGC CCTTGCGCAA GCTGCGCACC GCCCTCGGCA CGATCCGCCG CGGCGAGGCC
GACCGGATCG ACGGCGAGTA CCCCCGCGAC ATCGCTCCGC TGGCGGGCGA GATCAACCTC
TTGATCGAGA CCAACCGGGA GATCCTCGAG CGCGCCCGCA CCCAGGTCGG AAACCTCGCC
CATGCGCTGA AGACCCCGCT GTCGATCATC GTCAACGAGG CCGGGAGCAG CGACGCGCCG
CCGGAGCTGT CGGAGAAGAT CCGCGAGCAG GCGGCGGTGA TGCGCGATCA GGTGAACTAC
CATCTCGACC GCGCCCGCGC CGCGGCGCTG GCCGGCACCC TCGGCACCTC GACGGACGTC
GAGCCGGCGC TCGCCGGCCT CGTGCGGACC TTTGGCAAGA TCTACCGCGA CAAGGACATC
GCCTACGAGG TCCACGTGCC GCCCGGCCTG CGCTTCCGCG GCGAGAAGCA GGACTTCGAG
GAGATGATCG GCAACCTCGT CGACAACGCC TCGAAATGGG CGACGGGCCG GGTCTCGATC
TCCGCCGCGC CGACGAACGA TCACGACTAT CCCCATCTCC TCGTGGCGGT GGAGGACGAC
GGGCCGGGCC TGCCGGAGGA GGACCGGGCG GCAGTGCTCA AGCGCGGCCG GCGCCTCGAC
GAGACCAAGC CCGGCTCCGG CCTCGGCCTG TCGATCGTGG CCGATCTCGC CGCGCTCTAC
CGCGGCCGCT TCCGCCTGGA GGCGGCGGCG CTGGGGGGCC TGCGCGCGGT CATCGAGGTG
CCGGGCGACG CGCCGGCGGG CGTCGGACAA CGCTGA
|
|---|
| Protein sequence | MTDRLAWLPL RRRSIAVRLA VSSFLSSTAI LVIAAFILTT LYRENTERAF DSRLLVFANN
LATDLVSPSD PETRSFSLGD PRFDLPLSGW YWQVGRPDAK PRDLRTSRSL VGVPLKGPDQ
AGTATIGQIR QGYGKGQDDR TLRIVERDVD VGADGRYTVR VAGPADEIVN DVERFRFSLF
MTFGLLGFSL AATALLQIRF GLAPLRKLRT ALGTIRRGEA DRIDGEYPRD IAPLAGEINL
LIETNREILE RARTQVGNLA HALKTPLSII VNEAGSSDAP PELSEKIREQ AAVMRDQVNY
HLDRARAAAL AGTLGTSTDV EPALAGLVRT FGKIYRDKDI AYEVHVPPGL RFRGEKQDFE
EMIGNLVDNA SKWATGRVSI SAAPTNDHDY PHLLVAVEDD GPGLPEEDRA AVLKRGRRLD
ETKPGSGLGL SIVADLAALY RGRFRLEAAA LGGLRAVIEV PGDAPAGVGQ R
|
|---|
| |