Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpop_1300 |
Symbol | |
ID | 6312485 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium populi BJ001 |
Kingdom | Bacteria |
Replicon accession | NC_010725 |
Strand | + |
Start bp | 1401217 |
End bp | 1402053 |
Gene Length | 837 bp |
Protein Length | 278 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 642650017 |
Product | UspA domain protein |
Protein accession | YP_001924006 |
Protein GI | 188580561 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0589] Universal stress protein UspA and related nucleotide-binding proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.085168 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTTACG CGAACATCCT GGTCTCGGTC GATCTCGGCG GGACCGCCGC CGAGCGCGTC CGGCTCGCCG CCGGCCTCGC GCGGCGCTTC GAGGCGACGC TCACGGGGGC GGCCGCCTGC CAGGTGCCGG CGCCGGACTA CGTGCGCGAC ATCGGCGAGA TCGACGACGA GGATCCGAAA TTCGAGGAGA AGGCGCGCGC CATGCTCGAA CGGGCCTGCG CCCTGTTCGA GCGCTCCGCC GACACCGCTG GCGACCATCC GGTGCGCCGC GCGTGGCGCG AGGCTCTGAC AGGCCCGATC ACCCATCTCG TCGAGCAGGC GCGGGCGGCC GACCTCGTCG TGGTGGGACG CCGCGGATCC GACGACCCTC CCCGCGGTGC CCTCGGCGCC CCGCCCGGCC CCGTCCTGAT GGAAGCCGCC CGCCCGGTCC TCGTGCTGCC CCCCCGCATG GAGCCGGCCG GCAGCGGGCT CCGGGGCGCA CGGATCGTCG TGGGCTGGAA GGACAGCCGG GAAGCGCGCC GGGCCGTCTC GGCCGCGCTG CCCTTCATCC GCGAGGCGGA TCAGGTCTTC GTCGCCAGCA CCGGCGAGGG CGCCCGCTAC GAGGGCGCGG AGGACGTGGC CGACCACCTC GCCCGCCACG GCGCCGCGGT CACGACCCAC CTGCTGCGCA CCGTCGTGAG CGACGGCGAC GAACTCCTGC GCTTCGCCCT GAAACAGGAG GCCGACCTGA TCGTGATGGG CGCCTACGGC CATGCCCGCC TGCGCGAATG GCTGTTCGGC GGCGTCACCT ACGAGATGCT GCAACGTAGC CCCATCCCTT GCCTGATGTG CCACTGA
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Protein sequence | MAYANILVSV DLGGTAAERV RLAAGLARRF EATLTGAAAC QVPAPDYVRD IGEIDDEDPK FEEKARAMLE RACALFERSA DTAGDHPVRR AWREALTGPI THLVEQARAA DLVVVGRRGS DDPPRGALGA PPGPVLMEAA RPVLVLPPRM EPAGSGLRGA RIVVGWKDSR EARRAVSAAL PFIREADQVF VASTGEGARY EGAEDVADHL ARHGAAVTTH LLRTVVSDGD ELLRFALKQE ADLIVMGAYG HARLREWLFG GVTYEMLQRS PIPCLMCH
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