Gene Mpop_1249 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpop_1249 
Symbol 
ID6313308 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium populi BJ001 
KingdomBacteria 
Replicon accessionNC_010725 
Strand
Start bp1336901 
End bp1338433 
Gene Length1533 bp 
Protein Length510 aa 
Translation table11 
GC content69% 
IMG OID642649966 
Productcitrate lyase, alpha subunit 
Protein accessionYP_001923955 
Protein GI188580510 
COG category[C] Energy production and conversion 
COG ID[COG3051] Citrate lyase, alpha subunit 
TIGRFAM ID[TIGR01584] citrate lyase, alpha subunit 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.0940044 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAATTC CGTCCTTTAT CGAGGGCTAC GGTGAGGTCA GACCCTTCAC CACCGCCTTC 
GCGGCACCGC TCGATGCGGT CCGGACCGGC GCCCGTATCC GGAGCCAGCG GCCCGGTCAG
AGCAAGGTTC TGCCCTCGAT CCGGGAGGCG ATCCTCGCCT GCGGGCTGAA GGACGGCGCC
ACCGTCTCCT TCCACCATCA CCTGCGCAAC GGCGACGACG TGCTGCGTGC GGTGATGCAT
GAGATCGCGG CCCTCGGCCT GCGCGATATC CGCGTCGCCG CGAGTTCGCT GTTTCCCGTT
CATGCGCCGC TCGTCGCGCA TATCCGCAGC GGGGTCGTGA CGGGGATCGT GTCGAACTAC
ATCACCGGTC CGGTGGCCGA GGCGATCACG GCGGGCGCGC TCCCGAACCC CGCGGTGCTG
CAGACCCATG GCGGCCGCGC CCGCGCGATC GAGGCCGGCG AACTCACCAT CGACGTCGCG
TTCGTGGCGG CGCCGGCCGC GGACGTCTAC GGCAACCTCA ACGGCATCGA CGGGCCCTCC
GCCTGCGGGC CCCTGGGCTA CCCGATGGTC GATGCCCGCC ACGCGGATCG TGTCGTGGCG
ATCACCGACA CGCTCTCACC GCATCCCCTG ACCTCCATCG ACATCGCGCA GGATCTCGTC
GACTACGTCG TCCCGGTGGA CTCGATCGGG GATGCCTCCA AGATCGTGTC GGGCACGACC
CGTGTCACCG AGGATCCCGT CGGGCTCGCC ATCGCGGTGC TGGCCGCGAG GGTCATCGAC
GCCTCGGGCC TCCTCGTCGA CGGCTTCTCG TTCCAGACCG GAGCGGGCGG GATCTCCCTC
GCCGTCGCTC AGGACGTCGC CGTCATCATG CGCGACAAGG GCGTGATCGG CAGCTTCGCG
GCGGGCGGCG TGCATGCGGG CATCGTCGCG ATGTTCCGGC AGGGCCTGTT CCGCACGCTG
TTCGACGTGC AGTGCTTCGA CCTCTCGGCC GTCGCGTCCT ACCGGGAGGA CAGAGGCCAC
ATGGCGATGT CGGCCTCACT GTACGCCAAC CCCGCCTCCA AGGGCGCCCT CGTCAACCAT
CTCGATTGCA TGGTGATGGG CGCGGCGGAG GTGGATATCG GCTTCAACGT CAACGTCACC
GCCGTGAACG GCGGCACGAT CATCGGCGGC TCCGGGGGGC ACGCCGACAC GGCCGCGGGC
GCCAAGCTCG CCCTCGTGAC GACCCGGCTC GCCGCGGGCG GCGCGCCCAA GATCGTCGAT
GCCGTCGAAT GCGTGACGAC CCCCGGCGAG ACGATCGACG TCGTCGTCAC GGAGGCTGGT
GTCGCGGTCA ATCCGCGGCG TGCCGACCTG CGTGAACGCC TCGCCGCGGC CGGGATGCCC
CTCGTCGAGA TCACGCGACT GCGCGATCTC GCATCGAGAC AGACCCGGGC CCAGGCGCGC
CCTCGGATCG ACCCTCAGGC GCGGATTGTC GCTGTCGTGG AATATCGTGA CGGAACGGTC
ATCGATGTCA TACGCCAGCG TGGGGGCAAA TAG
 
Protein sequence
MAIPSFIEGY GEVRPFTTAF AAPLDAVRTG ARIRSQRPGQ SKVLPSIREA ILACGLKDGA 
TVSFHHHLRN GDDVLRAVMH EIAALGLRDI RVAASSLFPV HAPLVAHIRS GVVTGIVSNY
ITGPVAEAIT AGALPNPAVL QTHGGRARAI EAGELTIDVA FVAAPAADVY GNLNGIDGPS
ACGPLGYPMV DARHADRVVA ITDTLSPHPL TSIDIAQDLV DYVVPVDSIG DASKIVSGTT
RVTEDPVGLA IAVLAARVID ASGLLVDGFS FQTGAGGISL AVAQDVAVIM RDKGVIGSFA
AGGVHAGIVA MFRQGLFRTL FDVQCFDLSA VASYREDRGH MAMSASLYAN PASKGALVNH
LDCMVMGAAE VDIGFNVNVT AVNGGTIIGG SGGHADTAAG AKLALVTTRL AAGGAPKIVD
AVECVTTPGE TIDVVVTEAG VAVNPRRADL RERLAAAGMP LVEITRLRDL ASRQTRAQAR
PRIDPQARIV AVVEYRDGTV IDVIRQRGGK