| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpop_1221 |
|---|
| Symbol | |
|---|
| ID | 6313635 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium populi BJ001 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010725 |
|---|
| Strand | + |
|---|
| Start bp | 1307846 |
|---|
| End bp | 1308406 |
|---|
| Gene Length | 561 bp |
|---|
| Protein Length | 186 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | 642649939 |
|---|
| Product | transcriptional regulator, TetR family |
|---|
| Protein accession | YP_001923928 |
|---|
| Protein GI | 188580483 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1309] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 0.342861 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGGAGAT CGAGCCGGGT TCAGGCAGGG GAGAACCGCG CCCGCATCGT GCAGGTCGCG
AGCGACCTGT TTCGTGCCCG CGGCATCGAG GCGGTCGGCA TCGCCGACGT GATGAAGGCG
GCCGGGATGA CGCAGGGCGG CTTCTACAAG CACTTCGCCA GCAAGGATGC GCTGGCGGCG
GAAGCCTGCG CACTCGCCTT CGCCAGCGCC GCCGAGACCT GGCGCGATGT GGCCCGAACG
GCGGCGGCGG AGGGGCGCGA CGGCGCCGCC GCCATCGCCG ACCACTACGC GTCGGTCCGG
CCGCCGAGCC GGACCTGCCC GATGATCGCG TTCGCGGCCG ATGCCGCCCG CCGCGGCAGC
GGGGATCCGG TGCAGCGGGC GTTCCGCGAG GGCGTGCAGA CCCTGTTCGA GACGTTCGCC
GACGCCGTGC AGGGCGATCC GACGCCCGAG GCCGGGGAGC CCCTGCGGAG CCGGTTCGCC
GCGATGGTCG GCTCGAACCT CCTGGCGCGC TCGGTGCAGC AGGAGGCCTG GGCCTCCCGC
GCCGCGCCGC CGGCCTCGTA G
|
|---|
| Protein sequence | MGRSSRVQAG ENRARIVQVA SDLFRARGIE AVGIADVMKA AGMTQGGFYK HFASKDALAA
EACALAFASA AETWRDVART AAAEGRDGAA AIADHYASVR PPSRTCPMIA FAADAARRGS
GDPVQRAFRE GVQTLFETFA DAVQGDPTPE AGEPLRSRFA AMVGSNLLAR SVQQEAWASR
AAPPAS
|
|---|
| |