Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpop_1164 |
Symbol | |
ID | 6311026 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium populi BJ001 |
Kingdom | Bacteria |
Replicon accession | NC_010725 |
Strand | + |
Start bp | 1244388 |
End bp | 1245125 |
Gene Length | 738 bp |
Protein Length | 245 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 642649882 |
Product | LmbE family protein |
Protein accession | YP_001923871 |
Protein GI | 188580426 |
COG category | [S] Function unknown |
COG ID | [COG2120] Uncharacterized proteins, LmbE homologs |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.147674 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCGCGCCG ATGCCTTCCT CGAAGCCGTG AAGGGCCTGC CCGTCGCCCC GCTCGCCACC CTTGTGCCGG ACGGGGGCGG CCTCGTCGTG GCCGCGCCGC ATCCGGACGA CGAGAGCCTC GGCTGCGGCG GGCTGATCGT GCAGGCGCTT GCGGAGGGCC GCGCCGTGCG CGTCGTCATC GTCAGCGACG GCTGCGGCTC GCACCCGAAT TCCAAAGCCT ATCCCCACGA CCGCCTGCGG GATCTTCGCG AATCCGAGAC CGTGCGGGCC ATGGCCGAAC TCGGGCTCGG CGCCGAGCAT GTCCATTTCC TGCGCCTGCC TGACGGCGGC GTGCCGAGCG AGGGTCCGCA GGCCGAGGCG GCGGCCGAGG CGATCGCCGA CATCGCCCGC GCGGCCGGGG CGAGCGCCCT GTTCGTGACG TGGCGGCACG ATCCGCATTG CGACCACACC GCCTCGGCGG CCATCGTCGA TCTCGCCCGC GCCCGGCTCC CCGGCATGGC GGCCTATGCC TATCCGGTCT GGGGCTGGAC CCTGCCGCCG GAGCGCGAGG TCGGGCCGGC GCCGGAGGGG TTTCGCCTCG CCGTGGAGGG CGAGCGCGCG GCCAAGCGGC GGGCGGTGGA GGCCCATGCC TCGCAGGTCT CCGGGCTGAT CGAGGACGAT CCCTCCGGCT TCCAGTTGGA GCCGGCGATG ATCGACCGGC TCTGCGGCCC GCACGAATGG TACATCGCCC TGCGCTGA
|
Protein sequence | MRADAFLEAV KGLPVAPLAT LVPDGGGLVV AAPHPDDESL GCGGLIVQAL AEGRAVRVVI VSDGCGSHPN SKAYPHDRLR DLRESETVRA MAELGLGAEH VHFLRLPDGG VPSEGPQAEA AAEAIADIAR AAGASALFVT WRHDPHCDHT ASAAIVDLAR ARLPGMAAYA YPVWGWTLPP EREVGPAPEG FRLAVEGERA AKRRAVEAHA SQVSGLIEDD PSGFQLEPAM IDRLCGPHEW YIALR
|
| |