Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpop_1123 |
Symbol | |
ID | 6313800 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium populi BJ001 |
Kingdom | Bacteria |
Replicon accession | NC_010725 |
Strand | + |
Start bp | 1196944 |
End bp | 1197624 |
Gene Length | 681 bp |
Protein Length | 226 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 642649842 |
Product | isochorismatase hydrolase |
Protein accession | YP_001923831 |
Protein GI | 188580386 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG1335] Amidases related to nicotinamidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCGCCC CGCAGCCCCT TCTCGACGCC GAACCTGCGC CCCTGCCGTT CGATCCGGCG AGGACGGCCC TCGTCGTCAT CGACATGCAG CGCGACTTCC TCGAACCCGG CGGCTTCGGC GAGAGCCTGG GCAACGACGT CTCGCTGCTC GCCGCCGCGG TGCCGCCCGC CCGCGCCCTT CTGGCCGCCG CGCGCACGGC CGGCCTCCTC GTCGTCCACA CCCGCGAGGG ACACGCGCCC GATCTCTCCG ACGCCCCACC GGCCAAGCTG GAGCGCGGCG CGCCGACGGC GCGCATCGGC GCGCCGGGTC CGATGGGCCG CATCCTGATC CGCGGCGAGC CCGGCCACGA CATCGTCCCC GAACTCGCCC CCCTCGACGG CGAACCGGTG ATCGACAAGC CGGGCAAGGG CGCCTTCTAC GCGACCGGGC TCGCGGCCCT GCTGGAGGCC CGCGCCATCG AGACCCTGAT CGTCTGCGGC GTGACGACGG AGGTCTGCGT GCACACCACC GTGCGCGAGG CCAACGACCG CGGCTACCGC TGCGTCGTCG TCGCCGATGC CTGCGGCTCG TACATCCCGG CCTTCCACGA GGCGGGTCTT GCCATGATCA AGGCCCAGGG CGGCATCTTC GGCTGGGTCT CGCAATCCAC CGCGGTGATC GCCGCCCTCG GCGAAAGGTA A
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Protein sequence | MPAPQPLLDA EPAPLPFDPA RTALVVIDMQ RDFLEPGGFG ESLGNDVSLL AAAVPPARAL LAAARTAGLL VVHTREGHAP DLSDAPPAKL ERGAPTARIG APGPMGRILI RGEPGHDIVP ELAPLDGEPV IDKPGKGAFY ATGLAALLEA RAIETLIVCG VTTEVCVHTT VREANDRGYR CVVVADACGS YIPAFHEAGL AMIKAQGGIF GWVSQSTAVI AALGER
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