| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpop_1080 |
|---|
| Symbol | |
|---|
| ID | 6312809 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium populi BJ001 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010725 |
|---|
| Strand | + |
|---|
| Start bp | 1152088 |
|---|
| End bp | 1152606 |
|---|
| Gene Length | 519 bp |
|---|
| Protein Length | 172 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 642649801 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001923790 |
|---|
| Protein GI | 188580345 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG3194] Ureidoglycolate hydrolase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.249747 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.0256519 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCGACG CTTCGCCCGG CGGCGTCGCC ACCCGCGACC TGCGCATCGA GCCCCTGACG
CCGGAGGCCT TCGCGCCGTT CGGCACCGTC ATCGCCGCGG GCGCGGACGG TACGCCATTC
GGCCCGCAGG ACGCACAGCT CGAATTCGGG ACCGGCACGC CGCGCTTCTA CATCATGCGC
ATCCCGGGGC GCGGGCTCAC GGTCTCCGGC ATCACCCGCC ACCGGGCCTG CACGCAGACG
CTCGCCTCGG TCGGCGGGCT CCCCTGGGTG CTGGCGGTGG CGCCGCCGGA GGGGCTCGAT
GATCCAAGCG CCGAGCCCGC CCTCGACGCG ATCCGCGCCT TCGCGATCCC CGGCGACGTC
GCCGTGATGC TCTACCGCGG AAGCTGGCAC GCGGGGCCGC TGTTCGAGGG GGCCGAGCGC
AGCTTCTTCA ACCTCGAACT CGCCGACACG AACACGGCGG ACCACCAGAC CTGCCATCTG
AACCGGCGCT TCGCGGCGGC TTTGCGCTTG GTCGCGTGA
|
|---|
| Protein sequence | MSDASPGGVA TRDLRIEPLT PEAFAPFGTV IAAGADGTPF GPQDAQLEFG TGTPRFYIMR
IPGRGLTVSG ITRHRACTQT LASVGGLPWV LAVAPPEGLD DPSAEPALDA IRAFAIPGDV
AVMLYRGSWH AGPLFEGAER SFFNLELADT NTADHQTCHL NRRFAAALRL VA
|
|---|
| |