Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpop_1020 |
Symbol | |
ID | 6309627 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium populi BJ001 |
Kingdom | Bacteria |
Replicon accession | NC_010725 |
Strand | + |
Start bp | 1085374 |
End bp | 1085862 |
Gene Length | 489 bp |
Protein Length | 162 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 642649742 |
Product | SCP-like extracellular |
Protein accession | YP_001923731 |
Protein GI | 188580286 |
COG category | [S] Function unknown |
COG ID | [COG2340] Uncharacterized protein with SCP/PR1 domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCAAATC TGCGCCACTC CGCCGCCGCG GCTCTCATCA CGCTGACGCT TGCCGGCTGC GGCGGATCAC CCGTCCTCGA CGCCGGCGCG CCGACCGTAC CGGTGATTCT CGACGAGCAG GCCGCGGCGA CCGCGATCTC CCGCTATCGG GCGCAGCATG GCCTGAGTCC CGTCGTGATC GATTCCCGCC TCATCACCGC CGCCTCTTTC CAGGCGCAGG CCAATGCCCG GGCGGGCCGG CTCAGCCACG AACTCGCCGG TAGCTTCGAC AGCCGCATGG CGCATGTCGG CTTCGGCAAG CGCTACGCCT CCGAGAATCT GAGCGCCGGC TCCGAGACCT TCGATCAGGT CCTCGCCCGC TGGAAGGCGT CGCCCGAGCA CAACCGCAAC ATGCTGATGC CGCAGCTCCG GCGGATCGGC ATCGCCCGGA TCGATGCCCC GGCGACGCGC TACAAGCGGT TCTGGGCGCT GGTGATGGCG AGCGATTGA
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Protein sequence | MPNLRHSAAA ALITLTLAGC GGSPVLDAGA PTVPVILDEQ AAATAISRYR AQHGLSPVVI DSRLITAASF QAQANARAGR LSHELAGSFD SRMAHVGFGK RYASENLSAG SETFDQVLAR WKASPEHNRN MLMPQLRRIG IARIDAPATR YKRFWALVMA SD
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