Gene Mpop_1020 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpop_1020 
Symbol 
ID6309627 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium populi BJ001 
KingdomBacteria 
Replicon accessionNC_010725 
Strand
Start bp1085374 
End bp1085862 
Gene Length489 bp 
Protein Length162 aa 
Translation table11 
GC content69% 
IMG OID642649742 
ProductSCP-like extracellular 
Protein accessionYP_001923731 
Protein GI188580286 
COG category[S] Function unknown 
COG ID[COG2340] Uncharacterized protein with SCP/PR1 domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCAAATC TGCGCCACTC CGCCGCCGCG GCTCTCATCA CGCTGACGCT TGCCGGCTGC 
GGCGGATCAC CCGTCCTCGA CGCCGGCGCG CCGACCGTAC CGGTGATTCT CGACGAGCAG
GCCGCGGCGA CCGCGATCTC CCGCTATCGG GCGCAGCATG GCCTGAGTCC CGTCGTGATC
GATTCCCGCC TCATCACCGC CGCCTCTTTC CAGGCGCAGG CCAATGCCCG GGCGGGCCGG
CTCAGCCACG AACTCGCCGG TAGCTTCGAC AGCCGCATGG CGCATGTCGG CTTCGGCAAG
CGCTACGCCT CCGAGAATCT GAGCGCCGGC TCCGAGACCT TCGATCAGGT CCTCGCCCGC
TGGAAGGCGT CGCCCGAGCA CAACCGCAAC ATGCTGATGC CGCAGCTCCG GCGGATCGGC
ATCGCCCGGA TCGATGCCCC GGCGACGCGC TACAAGCGGT TCTGGGCGCT GGTGATGGCG
AGCGATTGA
 
Protein sequence
MPNLRHSAAA ALITLTLAGC GGSPVLDAGA PTVPVILDEQ AAATAISRYR AQHGLSPVVI 
DSRLITAASF QAQANARAGR LSHELAGSFD SRMAHVGFGK RYASENLSAG SETFDQVLAR
WKASPEHNRN MLMPQLRRIG IARIDAPATR YKRFWALVMA SD