| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpop_0943 |
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| Symbol | |
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| ID | 6308868 |
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| Type | |
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| Is gene spliced | No |
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| Is pseudo gene | Yes |
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| Organism name | Methylobacterium populi BJ001 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010725 |
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| Strand | - |
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| Start bp | 994864 |
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| End bp | 998262 |
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| Gene Length | 3399 bp |
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| Protein Length | |
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| Translation table | |
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| GC content | 69% |
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| IMG OID | 642923108 |
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| Product | |
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| Protein accession | |
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| Protein GI | |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCTCAC GTTCGAGCAC CGAGCCGCAT CTCGACAGGC TGATCCGCCG CGATCAACTC
GATGCGGTGC GCGGAAGCGT GCAGCAGGCG CTGCCCGTCA ACGCGCTTCT GGGTCTGGCG
AGCTTTCTGG TGGCGCTGCA TTCGGGGCAC GGTGCCGCGG GGGCGCTGTG GTTCTCGGCC
TCCTCCCTCG TCAACGGGCT GCGCTTCGGC CTGTGCCGCG CGCGCTGTGA AGGGCTGGCG
ATCGCGGCGG ACGGGGGAAC CGTCTTTGGC GAGGTTGCGT CCCGCTCGGT CGACCGGCAC
CTGCGGCTGG CCTGCCTCGC CGCGCTGCTG TCCGGCTCCG TCTGGGCCTT CCTGCCGATC
CTGTGCGGCG GATACACCGC GCCTCAGACG CTGTTCTACC TCACCATCAC GGTAGCGTCC
GCGGACGAGG TGTAAATTCG AGGACCGCTT TGGCGGGGAT TGGGGTGGCC ATCGGGCCAT
GCGGCTAAGG TGGAGTTTGC GGACTTCAAC CCGAACCGGG AGCACCCGAT GACCGACGAC
AGAGTGGCAC TGATCGAGGC TTTTCAGAAG GCTGACGACG GCAACTTCCT GCGCAGCCTG
GCCGAGACGG TCCTGCAGAT CCTGATGGAG GCCGATGTGG ACGGTCTGAT CGGCGCGGGT
CGTTACGAGC GGTCTGGCGA GCGCAGCACC TACCGCAACG GGTATCGCGA ACGCAGCCTC
GACACGCGGC TGGGCTCGCT CAACCTCAAG ATCCCCAAGC TGCGCACCGG CAGCTACTTC
CCCGGCTTCC TGGAGCCAAG GAAGACCGTC GAGAAGGCGC TGGTGGCGGT GATCCAGGAG
GCGTGGATCG CAGGCGTGTC GACTCGGCGC GTGGACGACC TGGTGCAGGC CATGGGGCTG
TCGGGCATCT CGAAGTCCTC CGTGTCGAAG CTGTGCAAGG ACATCGATGA GCGGGTGAAC
GCCTTCCTCA AGCGCCCGCT GTCCGGCGCA TGGCCCTATC TCTGGCTCGA CGCCACCTAC
CTCAAGGTGC GTGAGGGCGG GCGCATCGTC TCCGTAGCCG CCATAGTCGC CGTGGCGGTG
GACACCGAAG GTCGACGCGA GATCATCGGG CTGCACATCG GCCCGTCCGA GGCCGAGGTG
TTCTGGACCG ATTTCCTGCG CGACCTGGTC AAGCGCGGGC TGTCAGGTGT GCAACTTGTC
ATCTCGGACG CGCACGAGGG GCTTAAAGCC GCCATATGCC GCGTCCTGAA GGCGACCTGG
CAAAGGTGCC GGGTTCATTG GACCCGCAAC GCGCTCGCTT ATGTGCCGCG CGCTCAGCAG
ACCATGGTCG CCGCCGGCTT GCGCCACGCC TTCCAGCAGC CCGACCAGGA GGCAGCCCGA
GCCGCGCTCC ACCATCTGGC TGAGCAGCTT CACAACCGTT GGCCGAAGCT CAAAGGCTTC
ATCGATGCCA CGAGCGAGGA CGTGCTCGCC TACCTGACGT TCCCGCTGCA GCACCGAACG
AAGTTGCACT CCACAAACCC GCTGGAGCGT CTCAACAAGG AGATCAAGCG ACGCGCCGAC
GTGGTGGGCA TCTTCCCCAA CACCGACTCG ATCCAGCGTC TGATCGGAGC CGTGCTGTTG
GAGGCCAACG ACGAATGGCA GCTCCAGCAC CGCTACATGC AGATCGAGGG CATGGCTGGC
TTCACCCCGA GCCTGCTCGA CGACACCCTC ACAGCAATTC CACCTCAGGC CGCCTGACCG
ATGGCCGCTC CAACTCCACC CCGAATTTCC ACCTCATTGA CGGACACGAC CACCATCACC
TGCGGCATCA CCGCCGGCGC GGTCACGCAC GGCATCGCCT ACGCCCGCAT CCCGATCTGC
TTCATCACGC CGCCGCTGCT GTCGGTGGCG GGCTGCCTGC TCGCCGTCGG CGGATTCGAC
CGGACCTGTC TCGCCGCCAC CGTCCTGCTC TACCTCGCCG CGTTGATCCG CAGCGCGATC
GCGACGGAGC GGGGGTTTCG CGAGACGAGC CGCCTGAAGA ACGAGGCGAC CGCGCTTGCC
GAGGCGCGCA AGGCCGCCCA TGCGAGCGCG AGCGCCCTGG CGGAGGAGAT GCGCGAGCGG
GCGACGCATG ACGGCCTGAC CGGGCTGCTG AACCGCGCCG GCTTCGTCCA GCGGGCGGAG
GAGCGGCTGG CGTCCGGCGC GCCGGTCTGC CTGATGCTGC TCGACCTCGA CGGGTTCAAG
TCGGTCAACG ACGTCTACGG CCACACCACC GGCGACCGGG TGCTGGTCGA GGTCGCCCGG
CGCATCCGGG CCGCCGTGCC GATGGAGTGC GACGCGGCCC GCCTCGGCGG GGATGAGTTC
GCCCTCGTCT ACGACACCAC CCGGGTGATC GAGAGCCCGT CGGCGCTGGC CGACCGCCTC
ATCCGCACCG TGGCCGAGCC GTTCGAGAGC TTCGACACGC GGCGCCTGGG CATGAGCATC
GGCATCTGCC AGCGGCCGGC CGACAGCCTG ACGCATCTGC TGAGTTGCGC CGACGAGGCG
CTCTACGCGG CCAAGCATTC GGGCCGCAAC CATTTCCGCC TGTTCGACGA GGGCCTGCGC
ACGCGCCTGG AGGTGCGGCG CGACTGTGAG CGCGACCTGT CGCAGGCGCT GGCCGAGGGG
GCGCTGGAGA TGTGGTTCCA GCCGATCTTC GGGCGGGACG GTCGCAGCGT GGCCAACTTG
GAGGCGCTGG TGCGCTGGCG CCACCCGGTG CACGGCTGGG TGCCGCCCGC GGACCTGATC
GCCGCCGCCG CCATGGCCGG GCTGACGGAA TCGCTCCTGC GCTTCATCCT GGAGCAGACC
TGCGGGATGC TCTGCGCGCT GCGGGATCGG GGCCTGCACG ACCTCTCGGT GGCGATGAAC
GTCTCGCCGC GGGAGATGGC GCAGATCGCC GTCGACGAGA TCGTCCTCGG CCGGCTCCGG
GTGCTCGGCC TGCCGGCGAC AGCCCTGGAG ATCGAGATCA CCGAGGAGAC GGCACTCGAT
ATCGAGGCGG TACAAGGCAA GCTACTGGCG CTGTCGCGGG CCGGGATCCG GATGGCGCTC
GACGATTTCG GCACCGGCTA CTCGTCGCTC GCCTCGCTGC GCCAGTTGCG GGCCGGGCGG
GTCAAGATCG ACCGCAGCCT CGTCACCGGG CTGACCGAGG CCGAGGACAA GCGCGGCCTC
GTCCAGGCGG TGCTCGGCCT CGGCCGGGCG CTCGGCCTCG AAGTCGTGGC GGAGGGGGTC
GAGACGGCGG ACGACCTCGC CACGCTGCAG AGCATGGGCT GTCCCTTCAT GCAGGGCTAC
CATCTCGGCC GCCCGCAGCC CGCCGAGGAC ATCCTGCGCT TCCTCGATGC GCGCCCCGGC
GCCGACGTCC AGGCCCGCCT CCACCTGCGT GGCGCGTGA
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| Protein sequence | |
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