| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpop_0815 |
|---|
| Symbol | |
|---|
| ID | 6309794 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium populi BJ001 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010725 |
|---|
| Strand | - |
|---|
| Start bp | 870891 |
|---|
| End bp | 872198 |
|---|
| Gene Length | 1308 bp |
|---|
| Protein Length | 435 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 642649531 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001923528 |
|---|
| Protein GI | 188580083 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.872238 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 0.105867 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCGAGTT CCCGTTCCCT GACGCCTCTG GACGCGTCGC AATACGATGC CATCGAGGAC
GCCGTCCGCG AGACCGAGCG GGGCCGGTGG TTCCTGGCGG AATACGCCCG GCGCAACCGC
AACGCCGACA CGGAGGTGCT GCTGGACGCG ATCCGGCGCA TCGAGAACGT CGTCAGCACG
ACCGACCGGC CGGACGATGT CGGGCGCTTC CGCGGCGACC TGATGGAGAT GGCCGACGCC
ATCGCCCGCA CCCGCGCCGA GGTGGCTGCC CTCTCCGCGC CGGATCAGGG CGAAAGCCGG
CTTACCGTCG CCTCCGAGGC CCTCGACGCG ATCGTGCGCG CCACCGAGCG GGCCACCTCC
GACATTCTGA GTGCGGCGGA AGAGGTGCAG GAGGCCGCTT GGACCCTGCG CGAGACCGGC
GCCGATTCCG AGATGTGCGA TGCCCTCGAC CGGCACGCCA CGCAGATCTA CACCGCCTGC
TCGTTCCAGG ATCTCACGGC GCAGCGCACC AGCCGCGTGG TGCACACCCT GCGCTACCTC
GAGAACCGCA TCGCCTCGAT GATCGGCATC TGGGGCAATC CCGACGACGC GGTGCCCTCC
CTCGACGAAA GAGCCCGCGC GGAGGCCGCC GCCGCCCTCG ACCAGAGCGA CGTCGATCGC
TTCCTCGACA TGGAAGGTCC GGTCCCGGCG CCGGCCAGGG CCCCCCTGCC GCCGCTGCCG
TCCGTGACGC TGGACGACGA CCTCGCCTTC CTGCCGGACG CCCCCGAGCG GGACGAGCCG
GTCCGCGCCG AGGAGGCGGT CGCGGTGTCC TCGCCCGCCA TGCTCCTTGC CGCGGCGATC
GCGGCGGATC TCGCGGCCCT GGAGAGGTCG TCGCAGGGGG CGGTCGAGGC CGTGGCCGAA
CCGATCGTGG CGATGGGATC GGAGGAGGCC GGGACCGTGT TCGACGCCGC CTCCGGCGGC
GAAGTGACCG CCGAGGCCGA AGAGGCGTTG GAACAGGCTT GGGAAGAGGC CCAGGTCGAA
GAGATCCCGG TCGAAGAGAC CCAGGTCGAA GAGGGTCTAG AAACGGCCCC GGAAATCGAC
GGGGCTGAAG AGATGGAAGA CGTCGCCGGG CGCGAAGAGC CGGCGCAGGA TGAGCCGTCC
GACGCCGCCG CCGACGTCAC CCTCCTGGCG GAGTCCGAAG CGGCCATGCC GGTGGCCGAG
CCCCTGGTCG TGGCGCCGGT CGCGCTGATC GACGAGGACG ACCTGGCCCT GGCCTTCCCC
GATCTCGACA CCCTGAGCAT CGAGGAGAAG ATCGCGCTCT TCGCGTGA
|
|---|
| Protein sequence | MSSSRSLTPL DASQYDAIED AVRETERGRW FLAEYARRNR NADTEVLLDA IRRIENVVST
TDRPDDVGRF RGDLMEMADA IARTRAEVAA LSAPDQGESR LTVASEALDA IVRATERATS
DILSAAEEVQ EAAWTLRETG ADSEMCDALD RHATQIYTAC SFQDLTAQRT SRVVHTLRYL
ENRIASMIGI WGNPDDAVPS LDERARAEAA AALDQSDVDR FLDMEGPVPA PARAPLPPLP
SVTLDDDLAF LPDAPERDEP VRAEEAVAVS SPAMLLAAAI AADLAALERS SQGAVEAVAE
PIVAMGSEEA GTVFDAASGG EVTAEAEEAL EQAWEEAQVE EIPVEETQVE EGLETAPEID
GAEEMEDVAG REEPAQDEPS DAAADVTLLA ESEAAMPVAE PLVVAPVALI DEDDLALAFP
DLDTLSIEEK IALFA
|
|---|
| |