| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpop_0708 |
|---|
| Symbol | |
|---|
| ID | 6310592 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium populi BJ001 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010725 |
|---|
| Strand | + |
|---|
| Start bp | 753361 |
|---|
| End bp | 754896 |
|---|
| Gene Length | 1536 bp |
|---|
| Protein Length | 511 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | 642649417 |
|---|
| Product | HemY domain protein |
|---|
| Protein accession | YP_001923421 |
|---|
| Protein GI | 188579976 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3898] Uncharacterized membrane-bound protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.408279 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 0.581697 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTGGCGCG CCCTCGTCTT CCTGGCCCTC CTGGCCGTCG CCGCCTACGG CGCGGTATGG
ATCGCCGACC ATCCGGGCAC CGTGACCGTC GTCTGGAACG GCTACGAGAT CGGCACGAGC
CTCGCCATCG CGCTGACCGG CGTGCTGGTG GCGGCGATCA TCCTCGGCCT CATCTGGGCG
ATCGTGACGG GCGTGATCGG CCTGCCGGCC AGCATCAGCC GTTCGACCCG CGAGCGGCGC
CGCAACAAGG GCCTCGCCTC GCTCTCGCGC GGCATGATCG CGGTCGGCTC AGGCGATCCG
CTCGCCGCCC GCCGCCATGC GGGCGATGCC GAGCGCCTGC TCGGCAGCCA GCCGCTGACG
CTTCTCCTCA AGGCCCAGGC GGCCCAGATC TCCGGTGACC GGGACGCGGC CGAGCAGGCG
TTCAAGCGCA TGGCGGACGA TCCCGAGACC CGGGTGCTGG GTCTGCGCGG GCTGTTCGTG
GAGGCCCGCC GCCGCGAGGA CGAGGGCGCC GCGCGCGCCT ACGCCGCCGA GGCCGCCCGG
CTCGCGCCGA GCGTCACCTG GGCGAACGAG GCGGTGCTGG AGGCGCAGTG CGCCGATGGC
GAATGGTCGG CCGCCACCGA GACGGTGGAG CGCCGCGCCG CGCTCGGCCT GATGGACAAG
CATGCCGCCC GCCGCCAGCG CGCGGTGCTG CTCACCGCCG CGGCGCAGCG CCACGAAGCC
GGCGAGCCCG AGACCGCCAC GGAGCAGGCG CTGAAGGCGG TCAAGCTCGC CCCCGACCTC
GTGCCTGCGG CGGTGATCGC GGGCCGGCTG CTCGCTCGCC GCAACGACTT GCGCAAGGCC
GCCAAGATCA TCGAGGCGGC CTGGAAGGCG ACGCCGCATC CGGAACTCGG AAAGGTCTAC
CTCAACCTGC GCACGGGCGA TTCCGCCCGC GACCGGCTGG CCCGTGCAGA GACCCTGGCC
AAGCTGTCGT CCTGGGATCC GGAATCGCGC CTCGTGATCG CCCAGGCCGC GAGCGAGTCC
AAGGATTTCG CCCGTGCCCG CGAGGTTCTG GCGCCGCTGG TCGATGACCG GCCGACGTCC
CGCGTCTGCC GGATGATGGC GCGGATCGAG GCCGCGGAGC ACGGGGCCGA CAGCGGGCGC
TCCCGCGAGT GGCTCGCCCG CGCGGCCCGC GCCCCGCGCG ATCCGGCCTG GGTCGCCGAC
GGCGTGGTCT CCGAGCGCTG GGCGCCGGTC TCACCGGTCA CCGGCCGTCT CGACGCTTTC
GTGTGGAAGA CGCCGCCGGA GATCCTCGCC GGCCCCGAGG ACGACGACGC TCCCGTTCCG
GCCTCTCCCG AACCCACGGC TCCGGCCGCC ATCCCGGCCT CCTCGGGTCC GGCCCCCATC
ACCACCGACA GCCCGGCACC CTCCACGCCC GGCTTCCTCC AGACGGGCGC CGGAACGCCG
TCGGCCCCGC CGTCGCCCGC CCCGGTCAAC GCGCCCGCCG GCTCCCCGGC GGCGACGCAG
ACGACGGCCG CGGACCGCGC CCGCCGCATC GCCTGA
|
|---|
| Protein sequence | MWRALVFLAL LAVAAYGAVW IADHPGTVTV VWNGYEIGTS LAIALTGVLV AAIILGLIWA
IVTGVIGLPA SISRSTRERR RNKGLASLSR GMIAVGSGDP LAARRHAGDA ERLLGSQPLT
LLLKAQAAQI SGDRDAAEQA FKRMADDPET RVLGLRGLFV EARRREDEGA ARAYAAEAAR
LAPSVTWANE AVLEAQCADG EWSAATETVE RRAALGLMDK HAARRQRAVL LTAAAQRHEA
GEPETATEQA LKAVKLAPDL VPAAVIAGRL LARRNDLRKA AKIIEAAWKA TPHPELGKVY
LNLRTGDSAR DRLARAETLA KLSSWDPESR LVIAQAASES KDFARAREVL APLVDDRPTS
RVCRMMARIE AAEHGADSGR SREWLARAAR APRDPAWVAD GVVSERWAPV SPVTGRLDAF
VWKTPPEILA GPEDDDAPVP ASPEPTAPAA IPASSGPAPI TTDSPAPSTP GFLQTGAGTP
SAPPSPAPVN APAGSPAATQ TTAADRARRI A
|
|---|
| |