| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpop_0561 |
|---|
| Symbol | |
|---|
| ID | 6310083 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium populi BJ001 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010725 |
|---|
| Strand | + |
|---|
| Start bp | 609240 |
|---|
| End bp | 609941 |
|---|
| Gene Length | 702 bp |
|---|
| Protein Length | 233 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 642649269 |
|---|
| Product | endonuclease III |
|---|
| Protein accession | YP_001923274 |
|---|
| Protein GI | 188579829 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0177] Predicted EndoIII-related endonuclease |
|---|
| TIGRFAM ID | [TIGR01083] endonuclease III |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 0.1956 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGCCGGCGC TCGCCGCAGG CGTCGAAACC GCGCCCGAAC CTGTCAACGA CGCGACGCTG
GTCGAGATCT TTTCGCGGCT GCAGGCGGCG GATCCGGAGC CCCGCTCGGA ACTCGAATAC
ATCAACCCCT ATACGCTGCT CGTCGCCGTG GTGCTCTCGG CCCAGGCCAC CGACAAGAGC
GTGAACCTCG CGACCGCGCC CCTCTTCGCC ATCGCCGACA CGCCGCAGAA GATGCTGGCT
CTCGGCGAGG AGCAGGTACG CCACTTCATC CGCACCATCG GCCTGTTCAA CACCAAGGCG
AAGAACGTCA TCGCGCTCTC GCAGATCCTG GTGGATCGGC ACGGCGGCGC GGTGCCGCGC
GAGGCCGAGG CCTTGGAGGT GCTGCCGGGC GTCGGCACCA AGACGGCGAG CGTCGTCCTC
AACGTGGCCT TCGGCGTACC GCGGATCGCG GTCGACACTC ACATCTTCCG CGTCTCGAAC
CGCATCCCGC TGTTCGTCGC GCCGACCACC GACAAGGTTC AGGCCGGGCT GGAGGCGCGG
GTGCCGGAGC CGTTCCGCCT CAACGCCCAC CACTGGCTCA TCCTGCACGG GCGCTACACC
TGCAAGGCGC GCCGGCCCGA ATGCCCGCGC TGCGCCCTTG CCGATCTCTG CCGCTACCCC
TCGAAGACGC TGGCCCTCAC CCCCATCTCC GCCGGGGATT AG
|
|---|
| Protein sequence | MPALAAGVET APEPVNDATL VEIFSRLQAA DPEPRSELEY INPYTLLVAV VLSAQATDKS
VNLATAPLFA IADTPQKMLA LGEEQVRHFI RTIGLFNTKA KNVIALSQIL VDRHGGAVPR
EAEALEVLPG VGTKTASVVL NVAFGVPRIA VDTHIFRVSN RIPLFVAPTT DKVQAGLEAR
VPEPFRLNAH HWLILHGRYT CKARRPECPR CALADLCRYP SKTLALTPIS AGD
|
|---|
| |