Gene Mpop_0507 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpop_0507 
Symbol 
ID6308724 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium populi BJ001 
KingdomBacteria 
Replicon accessionNC_010725 
Strand
Start bp540884 
End bp541963 
Gene Length1080 bp 
Protein Length359 aa 
Translation table11 
GC content70% 
IMG OID642649208 
Productsignal transduction histidine kinase 
Protein accessionYP_001923220 
Protein GI188579775 
COG category[T] Signal transduction mechanisms 
COG ID[COG3920] Signal transduction histidine kinase 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.918852 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.0364855 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGTGCTG ATACGCCAGA GGGCGGCTTT TCTGGGAGCG GCGGGACGGA GACGCCGTTC 
GACCTCGGTG ACGGCTTTCG CCGATTTGCC GACCATGTGC CGCTGATGAT GTGGCGGACG
GATGATTCCG GGCGCTCCAC CTATCACAAC GAGTGTTGGC TCCAGTTCAC GGGCCGCCCC
CTCGCCGACG AGATCGGCGA CGGCTGGCGG AAGGGGCTGC ATCCGGACGA TTTCCGGCGC
CACGCCGAAA TCGTCGAGAA GGCCTTCGAG TCGCGCCTGC CCTTCACGGT GGAGTTCCGC
CTTCGCCGTC ACGACGGCGC CTATCGTTGG CTGCTCGATA CCGGCCGGCC GCTCGAGGAG
AACGGGGTCT TCCACGGCTA TCTCGGCTCG TGCTTCGACA TCACCGACCG CAAGAACGCG
GAGGAGCATG CCGAGCGCGC CCTGGTCGAG AAGGAGACGC TGCTGGCGGA AATCTATCAC
CGGGTGCGCA ATAACCTCCA GGTGATGGTG AGCCTGATCG GCCTCTACGG CCGCGCCGCC
CCGGAGGCCT GCCGCGGCAG TTTCGACGCC CTGGGCCAGC GGGTGCGGGC CATCGCCCTG
GTACAGCAGC ACCTCCACGA GGCGCCGCAC ATCGCCTCGA TCGACCTGCG CGACTATCTG
CACCGGCTCG CCTCGGGGCT CGGACAACTG CGCCGGGCCG GGCGGATCGG CGTCACCATC
GAGGGCGACG GCACGAGCCT GGTCGAGCCC CGCACGGCAA ATGCGCTCGG CATGATCGTC
GCCGAGATCG TGGCTGAATG CCTCGATGCG ACGAGCGACA CCGTGACCTG CGGCATCGCC
ATCCGCATCG ATGCGGGGGT GGGGGCGCCG GTGCGCCTCG CGATCGTGTC GGGCTCCGGC
GAGGCCGCCG CGGCGGGGCG GGAGGGCGTT CCCAAGCTCG GGCCGCGCCT CATCGCGGCC
TATGCCGCCC AGGCGGAGAT TGCGGTGAGC GGCACGGCGA CCGCCGCCGA CCCGCTCCTT
CTGCAACTGC CCGAAGTCCG CGCCTACGTG CCCCCATCGC TGCCGCCCGG CCTGCGCTGA
 
Protein sequence
MGADTPEGGF SGSGGTETPF DLGDGFRRFA DHVPLMMWRT DDSGRSTYHN ECWLQFTGRP 
LADEIGDGWR KGLHPDDFRR HAEIVEKAFE SRLPFTVEFR LRRHDGAYRW LLDTGRPLEE
NGVFHGYLGS CFDITDRKNA EEHAERALVE KETLLAEIYH RVRNNLQVMV SLIGLYGRAA
PEACRGSFDA LGQRVRAIAL VQQHLHEAPH IASIDLRDYL HRLASGLGQL RRAGRIGVTI
EGDGTSLVEP RTANALGMIV AEIVAECLDA TSDTVTCGIA IRIDAGVGAP VRLAIVSGSG
EAAAAGREGV PKLGPRLIAA YAAQAEIAVS GTATAADPLL LQLPEVRAYV PPSLPPGLR