Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpop_0464 |
Symbol | |
ID | 6309536 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium populi BJ001 |
Kingdom | Bacteria |
Replicon accession | NC_010725 |
Strand | + |
Start bp | 495264 |
End bp | 495899 |
Gene Length | 636 bp |
Protein Length | 211 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 642649165 |
Product | transcriptional regulator, TetR family |
Protein accession | YP_001923177 |
Protein GI | 188579732 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.128175 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 46 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGTGCAG CGGCCGGCGC CGTCCTCGAC ACCCGCAACG GACAGGCGGC CCGGCGCGAG CACATCCTCG ACGCGGCCGA AGCCTGTTTC GTCCGGAACG GCTTCCACCG TACGACGATG CAGGATCTCG CCCGCGAGGC TTCGATGAGC CCGGGCAACA TCTACCGCTA CTTCGATTCC AAGGAGGCGG TCGTCCTCGG TCTGGCCGAG CGCGACCGCG AGCGGGGCGC CGTTCTGGTC GAGGCGATGG AGCGGGCCGG CGACAAGCGC GCCGTGCTGA TGGGCGTGCT CGCCCGCTTC TTCTTCGAGA TCACCCGCGA GGCGGCGATC CTGCGCCTCG ACGTCTGGGC GGAGGCAAGC CGCAATCCCG CCATCGGCGC CATGGTCGAG CGCGGCGACG AAGAGGGCCG CACTTGGCTC ATCGCGATGT TCGACACGAT CAAGACCTCG CCCGAATGCG ACCCGGCCGC CCTGTTCGAC GCGGTGGCGC CCCTGATGAA GGGCATCATC GTCAGCCGCG CGCTCGCTCC CGATTACGAT GCCGGGCCGG CCGTGGCGCA GCTTCAGGCG ATGATCGATG CCGGCTTGGC CGGTGCGCTT CCCCTCCCCC ACCTCGATCT GGAGACCGGC CGATGA
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Protein sequence | MSAAAGAVLD TRNGQAARRE HILDAAEACF VRNGFHRTTM QDLAREASMS PGNIYRYFDS KEAVVLGLAE RDRERGAVLV EAMERAGDKR AVLMGVLARF FFEITREAAI LRLDVWAEAS RNPAIGAMVE RGDEEGRTWL IAMFDTIKTS PECDPAALFD AVAPLMKGII VSRALAPDYD AGPAVAQLQA MIDAGLAGAL PLPHLDLETG R
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