| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpop_0396 |
|---|
| Symbol | |
|---|
| ID | 6312044 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium populi BJ001 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010725 |
|---|
| Strand | - |
|---|
| Start bp | 422016 |
|---|
| End bp | 425555 |
|---|
| Gene Length | 3540 bp |
|---|
| Protein Length | 1179 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | 642649096 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001923109 |
|---|
| Protein GI | 188579664 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG2982] Uncharacterized protein involved in outer membrane biogenesis |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.568269 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 0.674287 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCGTGATA TCCTGACCGC GCTCGCGGGC GCCGTCGTGC TGGTTCTCGT GGCGGCCCTG
GCCGTGCCGC CCTTCATCGA CTGGTCGGCC CATCGCGCGC TGATCGACCG CGCGCTGACG
GACTCCCTCG GCGCCGGTGC CCGCAGCGAG GGCGCCATCG ACCTGCGCCT GCTGCCCTCG
CCGCATCTGC GCCTCGCCCG GCTGCGACTC GGCGCCGAGG ATGGGCCGGC GCTCGATGCG
CGGAGCGTCG ATGCGGAGAT CGCCCTGGCG CCCCTGCTCA AGGGTGAGGT GCGCTTCGTC
CAGACCGCGA TCGAGCGTGC CGATCTCACC CTGCCGGTTT CCGACGAGGC GCTGCTGCTC
CCGCGCGAGC CGCAGGCGCT TCGCCGCGAC ATCGTGATCG ACGACCTGCG CATCCGCCGC
CTCAGCCTCG CCACCGCGCG CACCGGCGAG GCGCCGCAGG CGCAGTTCAC GGCCGAGAAC
CTGCGCCTCC GGGCCCCGGC GCTTGCCGGA CCGTGGCTAG TGGAGGGGAC GGCGAAGGGA
AGCCCCTTTC ACCTCGCCAC CAGCACCGCC GGCGGGGATG GCGGCGTCTC GCTGAAGCTC
ACGGGCGGCG GCGACACCAT GCCCCGCCTG GAACTCGATG CCCGACTCAC CTTCAAACCC
GAAGACGCTC CGGGCGGAAA CCGGGCGCAT CGCGGCCTCG TGCCCGAGGC GGAAGGCACG
GCGAGGCTCA CCGTCGGGCC GCCGGTCCAG CCGGCCGGCG CCGTTCTGCC GCTCACCCTC
GCGGCGAAAT TCGAGGCGCG CGGCCCCGTC GCGCAGGCCA AGACGGTGGA GATCGAACTC
GATCCCGGCG GCAAGGCGGC GCGGCTGTCG GGCAGCGGCC GGCTCGATCT GCGCGAGGCC
CGGCTCGGTC TGACGCTGCG CACCCGCCGG CTCGACCTCG ACGGGCTGCT GCTCTCCGGC
GGTGCGCGGG GAATGCTGGC CGGGGGGTTG TCCTCCGGGC TGTCCTCGGG CGCCCTGACG
CCGCCGCTGC TCCTCGACCT CGATCTCGCC GCCGAGAGCG TCGCCCTCGG CCTCGACGAT
TGGGCCGGCG TCGCCTTCCG CGGCACCTTC GATCGCGCCG GCGGCCTCGT GCTGCGGCGC
TTCGAGGGCA CGGCGCCCGG TTCGGCCCGC ATTTCGGCCA CCGGCGAGGC CGAGCTGTCG
GGCGCGCCCC GCTTCACGGG CCATATCGAC CTCGCCGCGC GCGATTCGGA GGGGCTCGGG
CGCTATCTCG GACGCATCGG CGCGGAGGAG AGCCTCGCGG CAATCCTCGA CGGGCGCGCC
TTCGAACTCG GCACGGACCT ATCCGCGGCC GGCGGCGACC TCTCGCTGCG CAACCTGCGC
CTCGCCCTCG GGGAAGCCCG CGTCACCGGC AACGCCCGGT ACGATCGCGG CGGCGCCGAC
GGGCGCGGCC GGCTCGACGC GCAGCTCTCC GCCAGCGGCA TCGACATCGC CGAACTGCCG
CCGCTGGGCG AGCTCATGTC GGGGCTCCAC CGGCACGACC TCGGCCTGAC GCTGAAGGCG
CGCGACGTGC GCTACGGACC CTCGGGCGCG CATTCCGGCA ACGGCACCAT CGCGGTGAGC
CTGCAATCGG ACGGCGCAAG CCTCGTCGTG GACACCCTCG ACATCGCCGA TCTCGCGGGT
GCGAGCGCGC AGCTCGCCGG GCGGATCGCC CCGGACGGGT CGGGACGGAT CGAAGGCCGG
GTGACGGCGG GCAAGGCAGC GCCGCTGCTC GCCCTTCTGG AGCGCGGCTT CCTGCCCGAG
GCCCGCCTCG TGCCCCAGGG CGTCCGCCAG AGCGGATTGG CCCTCGACCT GACCCTCGAG
CGCGAATCGG GCGAGGCGGA TGCCCTGCGC GCGACGGCGA AGGGGCGCGT GGGGGAGGGC
GATCTCGGTC TCGCGCTTCT GGCCCGCGCC GGACGGATCG ACCGCCTCGA CGCGACGCTG
ACGACGCCCA GGACCGGCCG CTGGTTCGGC CGCGACGACA TCGCCGCCCT GCGCCGGCCC
GGCCGCCTCC GGCTGACCGG GAGCCGTACG GCGACCGCTT CGGGCCAGGA GAGCGCGCCG
CTCGCGCTCG GCGTCGAGGG CGATCTTGCC GGCCTCACCC TCTCCACGCC GCGCCCGATC
CTGCTCGACA ATCTCGACCG GCCACCGGCC GGCGGCGAAT TGCGGCTGGA GACGCCCGAC
CTCGCGCCTT TCCTGATCCT CGCCGGCAGC GCTGCCCCGG CCGCCGAGGC GCTGCCCGCC
ACCCTGACAG TGAACCTGTC GCGCCGGAAC GCGGATGCGC ATGCCGAGGT GACGGGGCAG
GCGGCGGGCG CCGACCTCTC CGCCGCTCTC GATCGGGCCC CGGACGGGGC GCTTTCCGGC
ACCGCCACGC TGAGCCGTCT GTCTCTGCCG GCGCTCGCTG CGGCGACCGT GTTTCCAGCG
GGCGAGGGCA ACCGCTTCGC CGCGGTGCCG GCTCAGCCGC GGACCAGTTT GGGCCTCAAG
GTCGGGCAGC TCGATCTCGG CCGCGGCCTT GTCGCCGAGG GAGCGAACCT GACGCTGGTG
CGTGAGGGCG ATGCCCTGAG CCTACGCGAC CTTTCGGCCG GTCTCGCCGG CGGCCGGCTC
GGAGGCTCCG TCATGCTCGC CCGGCCGGCG GGCAGCGCCG CGATCTCGGG TGAGGGCAGT
GTCGACGGCG CCGACCTTGC CGCCTTGATC GGTCCCGGAC CGATCACCGG CCGGCTCTCG
GCGAAGCTGC GTTTCGGCGC CACGGGGGTG AGCCTCGCCG CCCTGTCGAA CGATCTTTCG
GGCAATGGCG AGATTCGGCT CCTCGACCTC ACGCTGCCCG GCGCCGATGC GGGCGCGCTG
GATCGAGCCC TCGGCAAGGC GCTGGCCGAG GACGATCCCC TGCGCGAGGG ACGGCTCCAG
GCGCTGGTGT CGGAGGAACT CTCGGCCGGT CCGCTCCGGG CCAAGGGTCT GGTCTCGGCC
GCCTTCACCC TATCGTCGGC CACCCTGCGC ACGGCTCCGT TCGGGATCGA TCTCGGGCCT
GCGCGCTGGA ACGGCACGCT GCAGGTCGAT CTGCGCAACC GCAGCCTCGA CGCTCGCGGC
GCCCTCACCG CGGCCGCCGC GCCGAAGGGC TGGTCCGGCG CCGCGCCCGC GATCCAGCTT
GGCTTCGGCG GACCGCTGAC CGCGCCCGAG CGGCGGCTCG ACGCGGCGCC GCTCACCACC
GGGCTCGCCG CCCTCGTGCT CCAGCGGGAG TTGGAGAAGA TCGAGCTGTT CGATGCCGAC
CAGAGCGAGC GCCAGCGCCG CCGCGCCCGG ATCGAGATGG ACCGCGCCCG CACGGCCGCC
GAGGACGCCG CCCGCCTGGC CCGGCTCAAG GCGCAGCAGG CCGCCGAGGA GGCGGCGCGG
CTCGCCCGTC AGCGCGAGGC CGAGGACGCC GCCCGCCGCG CGCGCCTGGA GGCCGAGCCG
TCCCAACCCG CGCCGGAGGC GCAGCCGCTC GATATCAGCC CGCCCGGCGC CCGGCCCTGA
|
|---|
| Protein sequence | MRDILTALAG AVVLVLVAAL AVPPFIDWSA HRALIDRALT DSLGAGARSE GAIDLRLLPS
PHLRLARLRL GAEDGPALDA RSVDAEIALA PLLKGEVRFV QTAIERADLT LPVSDEALLL
PREPQALRRD IVIDDLRIRR LSLATARTGE APQAQFTAEN LRLRAPALAG PWLVEGTAKG
SPFHLATSTA GGDGGVSLKL TGGGDTMPRL ELDARLTFKP EDAPGGNRAH RGLVPEAEGT
ARLTVGPPVQ PAGAVLPLTL AAKFEARGPV AQAKTVEIEL DPGGKAARLS GSGRLDLREA
RLGLTLRTRR LDLDGLLLSG GARGMLAGGL SSGLSSGALT PPLLLDLDLA AESVALGLDD
WAGVAFRGTF DRAGGLVLRR FEGTAPGSAR ISATGEAELS GAPRFTGHID LAARDSEGLG
RYLGRIGAEE SLAAILDGRA FELGTDLSAA GGDLSLRNLR LALGEARVTG NARYDRGGAD
GRGRLDAQLS ASGIDIAELP PLGELMSGLH RHDLGLTLKA RDVRYGPSGA HSGNGTIAVS
LQSDGASLVV DTLDIADLAG ASAQLAGRIA PDGSGRIEGR VTAGKAAPLL ALLERGFLPE
ARLVPQGVRQ SGLALDLTLE RESGEADALR ATAKGRVGEG DLGLALLARA GRIDRLDATL
TTPRTGRWFG RDDIAALRRP GRLRLTGSRT ATASGQESAP LALGVEGDLA GLTLSTPRPI
LLDNLDRPPA GGELRLETPD LAPFLILAGS AAPAAEALPA TLTVNLSRRN ADAHAEVTGQ
AAGADLSAAL DRAPDGALSG TATLSRLSLP ALAAATVFPA GEGNRFAAVP AQPRTSLGLK
VGQLDLGRGL VAEGANLTLV REGDALSLRD LSAGLAGGRL GGSVMLARPA GSAAISGEGS
VDGADLAALI GPGPITGRLS AKLRFGATGV SLAALSNDLS GNGEIRLLDL TLPGADAGAL
DRALGKALAE DDPLREGRLQ ALVSEELSAG PLRAKGLVSA AFTLSSATLR TAPFGIDLGP
ARWNGTLQVD LRNRSLDARG ALTAAAAPKG WSGAAPAIQL GFGGPLTAPE RRLDAAPLTT
GLAALVLQRE LEKIELFDAD QSERQRRRAR IEMDRARTAA EDAARLARLK AQQAAEEAAR
LARQREAEDA ARRARLEAEP SQPAPEAQPL DISPPGARP
|
|---|
| |