| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpop_0309 |
|---|
| Symbol | |
|---|
| ID | 6313834 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium populi BJ001 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010725 |
|---|
| Strand | + |
|---|
| Start bp | 328932 |
|---|
| End bp | 329504 |
|---|
| Gene Length | 573 bp |
|---|
| Protein Length | 190 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 642649010 |
|---|
| Product | putative PAS/PAC sensor protein |
|---|
| Protein accession | YP_001923025 |
|---|
| Protein GI | 188579580 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR00229] PAS domain S-box |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.882882 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 37 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCAGGCGC AATATTCCTC CCCGGCCGTT CCGGACGAGC TCAAACGCTA CTTCGAGCAG
GCGCACATCG CCCTGGCGCT TGCGGGTGTC GGCGATGACA ACCCCCTGCT CCTCGTCAAT
GAACCGTTTT ACAAGTTGAC CGGCTACGCC GCCCCAGAGG TGATCGGGCG CAACTGCCGT
CTGCTGCAGG GTGACACCGA GAATCCCGAG GCGAGAGAGA AGATTCACGC CTTCCTTGAG
GGCGACGCCG TGAACGCGGT GCGCACGACC ATCCTCAACG TCCGCAAGGA CGGCCAACCC
TTCGTTAATC TGCTTTACAT GTCCAAGCTG CGGGCCCTGT CGGGGGAGGT GCGCTTTCTT
TTCGCATCCC AATTCGACGT CAGCCGCTCG CAACCCGAAC TGCTCGCGGC GTACGATGCG
GAGCTGAGCC GGACCCTGTC CCGGCTACGT CCCTCCCTCG CCGAGAGTGG GATCGTCCTC
GAAGGGTCGC TGAAGGCGAT TGCCAACACC GTCGCCACCG TCGCCCAAGC CAAGCTCACC
CTCGCGGATC TCGATGGAAC CGGATTTCCC TGA
|
|---|
| Protein sequence | MQAQYSSPAV PDELKRYFEQ AHIALALAGV GDDNPLLLVN EPFYKLTGYA APEVIGRNCR
LLQGDTENPE AREKIHAFLE GDAVNAVRTT ILNVRKDGQP FVNLLYMSKL RALSGEVRFL
FASQFDVSRS QPELLAAYDA ELSRTLSRLR PSLAESGIVL EGSLKAIANT VATVAQAKLT
LADLDGTGFP
|
|---|
| |