Gene Mpop_0220 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpop_0220 
Symbol 
ID6312028 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium populi BJ001 
KingdomBacteria 
Replicon accessionNC_010725 
Strand
Start bp226130 
End bp226744 
Gene Length615 bp 
Protein Length204 aa 
Translation table11 
GC content70% 
IMG OID642648928 
ProductHhH-GPD family protein 
Protein accessionYP_001922943 
Protein GI188579498 
COG category[L] Replication, recombination and repair 
COG ID[COG0122] 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCGACG CCGCCCTGTA CGACCGTTTG CTCGGCGTGG CCGCTGAGGT CTCGGAGCCG 
TTGCGGACCA CCATCGCGGC AATCGGTGTC ATCGAGATCG CACCGCCGCC TCATGCCAGC
CTCGCCGAGC GGCTGTTCGT CGAGGTGGTG AACCAGCAGC TCTCCACCAA GGCTGCCCTC
TCGATCTGGA CGCGGATCGA GGCGGCCGCT GCGGCGCAGG TCGTGACACC GCGCGATCTG
TTCGTTCCCG GTTACGAGGC GGTGCTGCGC GGCTGCGGCG TCTCGGCAAA CAAGGTGCGC
GCGCTTCACG CCATCCGCGA GGCCGAGGAA GCCGGCCTGC TCGGACCGGA TCTCGCCGCG
CTGCCGCACG CAGAGCGCTC GGCTATGCTC TGCCGCATCC GTGGCGTCGG TCCATGGACG
GCCGACATGG CCGGCATCTT CCATTTCCTC GATCCCGACA TCTGGCCTGC CGGCGACGTG
GCCGCGGTCG GCGTGCTGCG CCGGCTTACG GGCATCGAGG ACACGGTCGC CGTCGCCGCG
CGCTTCGCGC CGTATCGCTC GATTCTTGCC CGCTACATGT GGCGCAGCCG GGACGCCGCT
CCGGTCGCTG CCTGA
 
Protein sequence
MLDAALYDRL LGVAAEVSEP LRTTIAAIGV IEIAPPPHAS LAERLFVEVV NQQLSTKAAL 
SIWTRIEAAA AAQVVTPRDL FVPGYEAVLR GCGVSANKVR ALHAIREAEE AGLLGPDLAA
LPHAERSAML CRIRGVGPWT ADMAGIFHFL DPDIWPAGDV AAVGVLRRLT GIEDTVAVAA
RFAPYRSILA RYMWRSRDAA PVAA