Gene Mpop_0105 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpop_0105 
Symbol 
ID6310838 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium populi BJ001 
KingdomBacteria 
Replicon accessionNC_010725 
Strand
Start bp111030 
End bp111779 
Gene Length750 bp 
Protein Length249 aa 
Translation table11 
GC content68% 
IMG OID642648815 
Productintegral membrane protein 
Protein accessionYP_001922832 
Protein GI188579387 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.74446 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAGCGCCG CCTTCGCCGC CCCGGGCTGG CTCCATGCCG TCTCGATTGC CGCGCTGCTG 
CTGGGGGCCG CCTGCGCGCT GCTGCTGTCG GTGGAGGTGG TCCGGCACCC ACAGCACATG
ACTGTGATGA ACGTGGTCTG GCCAGTCAGC GCCCTATTCG GGTCGGTGGC CGTGGTCTGG
GCCTACTTCC GCTACGGGCG CCTAGCGACC ATGGAGGCGC ACCACCGCGC GAAGGAGCGA
GGCGAGAAGC CGCCGAACAT GACCGGCACG CCGTTCGTCG TGATGGTCGG CAAGGGCGCG
CTTCACTGCG GCAGCGGCTG CATGCTGGGC GACGTCGCCG CCGAATGGCT GGCCTTCCTG
GTTCCGGCGG TGGCGGTCTG GTTCGGCTGG CAGTGGGCCT TCGAGGAGAA GATGTACGCC
GTGTGGGCGC TGGACTTCGT CTTCGCCTAT GCGCTCGGGA TCGTGTTCCA GTATTACGCC
ATCGTGCCGA TGCGGGGCCT CTCGCCGGGT GAGGGCCTGG TGGCCGCCCT CAAGGCCGAT
ACCCTGTCGC TGATCGCCTG GCAGGTGGGG ATGTACGGCC TGATGGCGCT GGTACAATTC
TGGCTCTTCC CGCGCCTGGC CGGGCAGCGG GCGCCGGTCA ACTCGGTCGA GTTCTGGTTC
GCCATGCAAC TCGCCATGGT CGCGGGGTAC CTGACCAGCT ACCCGGTGAA CTGGTGGCTC
GTCGGCTCCG GCATCAAGGA GCGGATGTAA
 
Protein sequence
MSAAFAAPGW LHAVSIAALL LGAACALLLS VEVVRHPQHM TVMNVVWPVS ALFGSVAVVW 
AYFRYGRLAT MEAHHRAKER GEKPPNMTGT PFVVMVGKGA LHCGSGCMLG DVAAEWLAFL
VPAVAVWFGW QWAFEEKMYA VWALDFVFAY ALGIVFQYYA IVPMRGLSPG EGLVAALKAD
TLSLIAWQVG MYGLMALVQF WLFPRLAGQR APVNSVEFWF AMQLAMVAGY LTSYPVNWWL
VGSGIKERM