Gene Mpop_0048 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpop_0048 
Symbol 
ID6310738 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium populi BJ001 
KingdomBacteria 
Replicon accessionNC_010725 
Strand
Start bp52595 
End bp53527 
Gene Length933 bp 
Protein Length310 aa 
Translation table11 
GC content72% 
IMG OID642648761 
Productmalonate decarboxylase subunit beta 
Protein accessionYP_001922779 
Protein GI188579334 
COG category[I] Lipid transport and metabolism 
COG ID[COG0777] Acetyl-CoA carboxylase beta subunit 
TIGRFAM ID[TIGR03133] malonate decarboxylase, beta subunit 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.179733 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.0754943 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGAAC GGATCATCGA CCCCGCCGCC AGGGGCTGGG CCACCAGTTG GTACGAGGCG 
AGCGCCCGCG CCCGCATCGA CGGCCTCCTC GACGCCGGAT CGTTCCGCGA GATCATCGGC
CCCGAGCAGC GCCGGATGAG TCCGCACCTG CCGCTGTTCG ACCTGCCGCG TGCCTTCGAC
GACGGCATGA TCATCGGATC GGGCCTCCTC GACGGCAAGC CGGTGCTCGT CGCCGCGCAG
GAGGGCCGCT TCATGGGCGG CGCCTTCGGC GAGGTGCACG GCGCCAAGCT CGTCGGCCTG
CTCCGCGCCG CCCTGGCGCT GAAGCCTGAC GCGGTGCTGA TCCTGTTCGA TACCGGCGGC
GTGCGTCTCC AGGAAGCCAA TGCCGGTGAG ACCGCCATCG CCGAGGTGAT GCGGGCGATC
ACGCAGGTGC GCGCCGCCGG CGTGCCGGTG ATCGGCTTGA TCGGCGGGCG GGCCGGCGCC
TATGGCGGCG GCGGGCTGAT CGCCGGCACC TGCTCGCGGC TCGTGGTCTC CGAGAGCGGG
CGCATCTCCG TCTCGGGGCC GGAGGTGATC GAGACCAACA AGGGCGCCGA GGAGTTCGAC
TCCCGCGACC GCGCCCTGGT CTGGCGCACC ATGGGCGGCA AGCACCGCCG GCTCACCGGA
GGCGCCGACG CCTTCGCCGA CGATACGGTC GAGGCGTTCC GGCAGGCAGC GCTCGACGCG
ATCGCGCGCG CGCCGGCCTT CGATCTGACC ACCCTTGAGG CCGAGCAGAG GCGGCTCGAA
GAGCGCCTCT CCCGCTTCGG CGATTGCCGC GACGCCACCG AGATCTGGGC GCGGCTCGGC
GTGAACGACC CGGAGGCGGT GCCGGCGCTG AGCACGGCCG ACTTCGACGC CCTGCTCGCC
AATCTCGGGG AGACCACCCA TGACGCTCGC TGA
 
Protein sequence
MSERIIDPAA RGWATSWYEA SARARIDGLL DAGSFREIIG PEQRRMSPHL PLFDLPRAFD 
DGMIIGSGLL DGKPVLVAAQ EGRFMGGAFG EVHGAKLVGL LRAALALKPD AVLILFDTGG
VRLQEANAGE TAIAEVMRAI TQVRAAGVPV IGLIGGRAGA YGGGGLIAGT CSRLVVSESG
RISVSGPEVI ETNKGAEEFD SRDRALVWRT MGGKHRRLTG GADAFADDTV EAFRQAALDA
IARAPAFDLT TLEAEQRRLE ERLSRFGDCR DATEIWARLG VNDPEAVPAL STADFDALLA
NLGETTHDAR