Gene Nther_2888 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNther_2888 
Symbol 
ID6315103 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNatranaerobius thermophilus JW/NM-WN-LF 
KingdomBacteria 
Replicon accessionNC_010718 
Strand
Start bp3119817 
End bp3120899 
Gene Length1083 bp 
Protein Length360 aa 
Translation table11 
GC content36% 
IMG OID642645259 
ProductABC transporter related 
Protein accessionYP_001919023 
Protein GI188587478 
COG category[E] Amino acid transport and metabolism 
COG ID[COG3842] ABC-type spermidine/putrescine transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones48 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones51 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGGAGA AGTTTACTAT CAAGTTAGAC CAGGTAAGTA AAACTTATGT TGGATCATTT 
GAACCAGCTG TTAACAATAT TAGTTTGGCC GTTGAAAAAG GTTCAATAAT TACATTACTA
GGTCCAAGCG GTTGTGGCAA ATCAACCACT CTTAGATTGA TAGCAGGTTT TGAATGTCCT
GATAATGGTG TAATAACTTT GGGAGATCAA GTAGTAAGTG ATAATAATTA TTGGGTTCCA
CCTGAAAGAC GAGGTGTGGG GATGGTTTTT CAAGACTATG CTTTATTTCC TCATCTTAAT
GTATTTGATA ATATAGGTTT TGGCTATAAA GCTAAGGATC GACTTAGCAG AATCAGAGAA
GTTATTAATT TAGTTGGTTT ACAGGGTTTC GAAAATCGTT ATCCCCACGA ATTATCTGGT
GGACAACAAC AAAGGGTAGC ACTGGCTAGG GCTTTAGCTC CCCGGCCAGT AGTAGTTTTA
CTAGATGAAC CTTTTAGTAA TTTGGACGCA GATATGCGTG CAAATATGAG GAATGAAGTC
AAGAAAATTA TAAAGGAGGC ACAAGCAACG GCGATTTTTG TATCCCATGA TCAGCTTGAT
GCCTTTGCAA TCTCTGATGA AATTATAGTG ATGAATAAGG GGACTATCCA GCAAAGAGGC
ACTCCAAGAG AAATTTATCA GTTTCCAGAG AACAAATTTG TTGCCGAATT TGTTGGGCAA
ACCAATATCT TAAAAGGAAA GATAGCAGAA GATGGACTGT TTGTTGAGAC TGAACTTGGG
CAAATTCCAT ATCCTCATAA ATATAATTTG AATTTAGATG GAGAAGTTTA TATTTCTATT
AGACCTGAAA GTTTAGAACT AGATGATAAT GGTCCTTTTG AAGGAATATT GAAGGAATCA
ATCTATAGAG GAGAAACTAT CGATGCTCTG GTAGAGGTTC AGTTTACAAA CGGCAAAAAG
GAACTATTAA TGCATATTCA TCCAGAAAAG GTTGTAAATA TTGGAGAACA GGTTAGGTTT
AAAATTTTAC AGGATTTTGT AGCTATAATC TGTAATAATC AACAAAGCAT AAATGAGTGT
TAA
 
Protein sequence
MQEKFTIKLD QVSKTYVGSF EPAVNNISLA VEKGSIITLL GPSGCGKSTT LRLIAGFECP 
DNGVITLGDQ VVSDNNYWVP PERRGVGMVF QDYALFPHLN VFDNIGFGYK AKDRLSRIRE
VINLVGLQGF ENRYPHELSG GQQQRVALAR ALAPRPVVVL LDEPFSNLDA DMRANMRNEV
KKIIKEAQAT AIFVSHDQLD AFAISDEIIV MNKGTIQQRG TPREIYQFPE NKFVAEFVGQ
TNILKGKIAE DGLFVETELG QIPYPHKYNL NLDGEVYISI RPESLELDDN GPFEGILKES
IYRGETIDAL VEVQFTNGKK ELLMHIHPEK VVNIGEQVRF KILQDFVAII CNNQQSINEC