Gene Nther_2556 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNther_2556 
Symbol 
ID6316585 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNatranaerobius thermophilus JW/NM-WN-LF 
KingdomBacteria 
Replicon accessionNC_010718 
Strand
Start bp2747074 
End bp2747793 
Gene Length720 bp 
Protein Length239 aa 
Translation table11 
GC content35% 
IMG OID642644937 
ProductSEC-C motif domain protein 
Protein accessionYP_001918702 
Protein GI188587157 
COG category[R] General function prediction only 
COG ID[COG3318] Predicted metal-binding protein related to the C-terminal domain of SecA 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones61 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCAGC TAGTTTTAGA CTACATTATA TCTCTGACCA ATTTATACGG TCTTGTTCAT 
AAGGATAAAG TGATAGAAAT TTATAATATG CAAAACAATG ATCAAATAAA CACAGATATA
ATTGACTCAT TAATGGAAGA GCCCCCTGAA GAGCTTGATA ATAGTTTTGT TGAAATACAC
GAAGACTATT TCGTCTCCGA GTCACTGATA GAATTTGATG AGTTTGAATA TCAATTAAAT
CAACGCATAG GTAAACCGTT CTACATTCCA CCGAAGAAAG AGCTATTAAA GTATAAAAAC
GATACCTATT TTGAGGTTAA TAAAGAATAT AAAGCCCTAT TAAACTATTT GACGGAAAAT
ATTTTTGATG GGGACAAGGC TGCAGCTGAA GGTTTGTGTG AAGATATTCA GGTTATTTGC
CAGTTCGGGT TTTCATTAAA CAAGGTCTTT GAGGAATTTA ACAATAGAGG GGTGGAATTT
GACAGTGAAG AACAAGCTCA CGAAGTCATG CAGCTTGTGA TAGATCTTTC TAATAACACT
AGGTTGTGGG AACATAATGG ACACACCCCC AGTGAGCTGC ATCAAAAGAA AGGAAAATCC
CAAAAGAGGT ATATTTCCAA CCAAAAAAAT AAGCCAAGAA GGGTTGGCAA AAAAATAGGT
AGAAATGAAC CTTGCCCCTG CGGAAGCGGT AAAAAGTACA AAAAATGTTG TTTGGACTAA
 
Protein sequence
MNQLVLDYII SLTNLYGLVH KDKVIEIYNM QNNDQINTDI IDSLMEEPPE ELDNSFVEIH 
EDYFVSESLI EFDEFEYQLN QRIGKPFYIP PKKELLKYKN DTYFEVNKEY KALLNYLTEN
IFDGDKAAAE GLCEDIQVIC QFGFSLNKVF EEFNNRGVEF DSEEQAHEVM QLVIDLSNNT
RLWEHNGHTP SELHQKKGKS QKRYISNQKN KPRRVGKKIG RNEPCPCGSG KKYKKCCLD