Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nther_2295 |
Symbol | |
ID | 6314452 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Natranaerobius thermophilus JW/NM-WN-LF |
Kingdom | Bacteria |
Replicon accession | NC_010718 |
Strand | - |
Start bp | 2439863 |
End bp | 2441290 |
Gene Length | 1428 bp |
Protein Length | 475 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 642644683 |
Product | MATE efflux family protein |
Protein accession | YP_001918449 |
Protein GI | 188586904 |
COG category | [V] Defense mechanisms |
COG ID | [COG0534] Na+-driven multidrug efflux pump |
TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.00026572 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 73 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGCGAC AGCTGTCCGG TGAAGAACGC CGGCTTTTAA TTTTAGAAGG TAGTCTTTAT AAAGCTGTGT TTTTCTTAGC CTGGCCTATG GTTATTCAGT CCTTGATGAT GATTTTGGTA GGAGCAGTAG ATATGATGAT GGTAGGAGCT CTGGGTTCCG ATGCTGTTGG TGCTGTAGGC ATGGCCAGGC AGGTGATTCA AATTATTGGA ATTTCCATTA TGGCAGTAGG CGTAGGATCC ACAGCCACTA TAGCCCGGTA TTACGGATAT AATGATATTA AAGGAGCAGT TAATGCTACT GGTCAGGCCT TGTATCTATT ATTCTTATTT TCTTTAATTA TTACCACAGT TGGCCTGGTG TTTTCTGAAG GAATTATGCA TCTACTAGGT GCTGAAGGGG ATTTATTAAC ACTGGGTACT GGCTATTTAC AGATCTTTTT TGCTGGCTCA TTATTTTTCT TAGGAAATTT TACACTGCGA TCAATTTTCC AGGGAACCGG TGATACCAAA ACACCCACAC AAATCGATGT GGCTACTAAC TTGCTCAATA TAGCTTTAAA TTATTTATTG ATTTTTGGTG TCGGCCCAGT ACCAGCTTTG GGAGTGCCCG GTGCGGCACT GGGCAGTTTA TTATCCAGGG TATTTGCTTT TTCTGTTGGG CTGTATGCTT TAAAACACCG GGGTTTCTAT TATATTCCCT CTGTGAAGGA ATTCATGGAA CTGAGCACTC ATAAGATGAA ACAAATTCTT CGCATCGGAA TTCCTGCTGC TCTGCAGGGA ATAACGAGAA GTGGAGGAAA TATAGTGGTC TTGGGGATGA TTGCCAGGAC AGCTGCCGGA AATGATGCGG TCTCAGGTTA CAGTGTGGGA TTAATGGTTT TTGCCTTCGC CTTGTTTCCT GCTCAGGCAG TGGGTAAATC TGCAGCTACT ATCATTGGTA TGAATTTGGG AGCTTATCAA AAGGATAGAG CTGAGGAAAG CGGTTGGAAG TGTACTGGCA TGGGAATGGG CATCATCGCC CTGTTTTCCT TAATAGTGTT TATCTTTGCT CCCCAGTTCA TCCGCTTATT TGTAGATGAT CCGGAAGTTG TGCGGATTGG TGCGAGCTTT GTCAGAATCC TGGCTGTAGT GGAGCCAATC CATGCCATGG GTTTAATACT GGCAAATGCT TTGCACGGTG CAGGAGAAAC CGTGGTTCCC TTCTATATCT CCTTACTATC TTGGGTGATA TTACGAGTGC CCTTCGCATA TTTCTTTGCC TTTGGCTTGG GTTTTCAAGA AACGGGTATC TGGATTGGAA TAGCTGTAAC ACAGGTGATT CAAGGTGTAT TGACTGCCTT AAAATTCCGA GAAGGTAAGT GGAAGGACAA AGAAATTACA GAAAGCTCCT CTGAAAATTT TTCCAGTAAA GTGACAGGAA AGGCGTAA
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Protein sequence | MLRQLSGEER RLLILEGSLY KAVFFLAWPM VIQSLMMILV GAVDMMMVGA LGSDAVGAVG MARQVIQIIG ISIMAVGVGS TATIARYYGY NDIKGAVNAT GQALYLLFLF SLIITTVGLV FSEGIMHLLG AEGDLLTLGT GYLQIFFAGS LFFLGNFTLR SIFQGTGDTK TPTQIDVATN LLNIALNYLL IFGVGPVPAL GVPGAALGSL LSRVFAFSVG LYALKHRGFY YIPSVKEFME LSTHKMKQIL RIGIPAALQG ITRSGGNIVV LGMIARTAAG NDAVSGYSVG LMVFAFALFP AQAVGKSAAT IIGMNLGAYQ KDRAEESGWK CTGMGMGIIA LFSLIVFIFA PQFIRLFVDD PEVVRIGASF VRILAVVEPI HAMGLILANA LHGAGETVVP FYISLLSWVI LRVPFAYFFA FGLGFQETGI WIGIAVTQVI QGVLTALKFR EGKWKDKEIT ESSSENFSSK VTGKA
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