| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nther_2295 |
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| Symbol | |
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| ID | 6314452 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Natranaerobius thermophilus JW/NM-WN-LF |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010718 |
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| Strand | - |
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| Start bp | 2439863 |
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| End bp | 2441290 |
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| Gene Length | 1428 bp |
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| Protein Length | 475 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 642644683 |
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| Product | MATE efflux family protein |
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| Protein accession | YP_001918449 |
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| Protein GI | 188586904 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0534] Na+-driven multidrug efflux pump |
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| TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.00026572 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 73 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCTGCGAC AGCTGTCCGG TGAAGAACGC CGGCTTTTAA TTTTAGAAGG TAGTCTTTAT
AAAGCTGTGT TTTTCTTAGC CTGGCCTATG GTTATTCAGT CCTTGATGAT GATTTTGGTA
GGAGCAGTAG ATATGATGAT GGTAGGAGCT CTGGGTTCCG ATGCTGTTGG TGCTGTAGGC
ATGGCCAGGC AGGTGATTCA AATTATTGGA ATTTCCATTA TGGCAGTAGG CGTAGGATCC
ACAGCCACTA TAGCCCGGTA TTACGGATAT AATGATATTA AAGGAGCAGT TAATGCTACT
GGTCAGGCCT TGTATCTATT ATTCTTATTT TCTTTAATTA TTACCACAGT TGGCCTGGTG
TTTTCTGAAG GAATTATGCA TCTACTAGGT GCTGAAGGGG ATTTATTAAC ACTGGGTACT
GGCTATTTAC AGATCTTTTT TGCTGGCTCA TTATTTTTCT TAGGAAATTT TACACTGCGA
TCAATTTTCC AGGGAACCGG TGATACCAAA ACACCCACAC AAATCGATGT GGCTACTAAC
TTGCTCAATA TAGCTTTAAA TTATTTATTG ATTTTTGGTG TCGGCCCAGT ACCAGCTTTG
GGAGTGCCCG GTGCGGCACT GGGCAGTTTA TTATCCAGGG TATTTGCTTT TTCTGTTGGG
CTGTATGCTT TAAAACACCG GGGTTTCTAT TATATTCCCT CTGTGAAGGA ATTCATGGAA
CTGAGCACTC ATAAGATGAA ACAAATTCTT CGCATCGGAA TTCCTGCTGC TCTGCAGGGA
ATAACGAGAA GTGGAGGAAA TATAGTGGTC TTGGGGATGA TTGCCAGGAC AGCTGCCGGA
AATGATGCGG TCTCAGGTTA CAGTGTGGGA TTAATGGTTT TTGCCTTCGC CTTGTTTCCT
GCTCAGGCAG TGGGTAAATC TGCAGCTACT ATCATTGGTA TGAATTTGGG AGCTTATCAA
AAGGATAGAG CTGAGGAAAG CGGTTGGAAG TGTACTGGCA TGGGAATGGG CATCATCGCC
CTGTTTTCCT TAATAGTGTT TATCTTTGCT CCCCAGTTCA TCCGCTTATT TGTAGATGAT
CCGGAAGTTG TGCGGATTGG TGCGAGCTTT GTCAGAATCC TGGCTGTAGT GGAGCCAATC
CATGCCATGG GTTTAATACT GGCAAATGCT TTGCACGGTG CAGGAGAAAC CGTGGTTCCC
TTCTATATCT CCTTACTATC TTGGGTGATA TTACGAGTGC CCTTCGCATA TTTCTTTGCC
TTTGGCTTGG GTTTTCAAGA AACGGGTATC TGGATTGGAA TAGCTGTAAC ACAGGTGATT
CAAGGTGTAT TGACTGCCTT AAAATTCCGA GAAGGTAAGT GGAAGGACAA AGAAATTACA
GAAAGCTCCT CTGAAAATTT TTCCAGTAAA GTGACAGGAA AGGCGTAA
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| Protein sequence | MLRQLSGEER RLLILEGSLY KAVFFLAWPM VIQSLMMILV GAVDMMMVGA LGSDAVGAVG
MARQVIQIIG ISIMAVGVGS TATIARYYGY NDIKGAVNAT GQALYLLFLF SLIITTVGLV
FSEGIMHLLG AEGDLLTLGT GYLQIFFAGS LFFLGNFTLR SIFQGTGDTK TPTQIDVATN
LLNIALNYLL IFGVGPVPAL GVPGAALGSL LSRVFAFSVG LYALKHRGFY YIPSVKEFME
LSTHKMKQIL RIGIPAALQG ITRSGGNIVV LGMIARTAAG NDAVSGYSVG LMVFAFALFP
AQAVGKSAAT IIGMNLGAYQ KDRAEESGWK CTGMGMGIIA LFSLIVFIFA PQFIRLFVDD
PEVVRIGASF VRILAVVEPI HAMGLILANA LHGAGETVVP FYISLLSWVI LRVPFAYFFA
FGLGFQETGI WIGIAVTQVI QGVLTALKFR EGKWKDKEIT ESSSENFSSK VTGKA
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